Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0863 |
Symbol | tgt |
ID | 5193056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 984798 |
End bp | 985931 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640585322 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001266209 |
Protein GI | 148546107 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.313127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGCA CCTGTCGAAT GTCCTTCGAA CTGCTGGCCA CCGACGGCAA GGCCCGTCGG GGTCGCATCA CCTTCCCACG CGGCACCGTG GAAACCCCGG CATTCATGCC GGTAGGGACC TATGGCACGG TCAAGGGCAT GCTGCCACGC GACATCGAGG CCATCGGCGC CGAGATGATC CTCGGCAACA CCTTCCACCT GTGGCTGCGT CCGGGCACCG AGGTGATCAA GAAGCACAAC GGCCTGCACG ATTTCATGCA GTGGAAAGGC CCGATCCTCA CCGACTCCGG TGGTTTCCAG GTATTCAGCC TGGGTGCCAT GCGCAAGATC AAGGAAGAGG GCGTGACCTT CGCTTCGCCG GTCGATGGTT CCAAGGTGTT CATGGGCCCG GAAGAGTCGA TGCAGGTTCA GCGTGACCTG GGCTCGGACG TGGTAATGAT CTTCGACGAG TGCACCCCGT ACCCGGCCGA GCACGATGTG GCACGCACTT CCATGGAACT GTCGCTGCGC TGGGCCCAGC GCTCGAAGAA CGCCCATGCC GACAACACCG CAGCGCTGTT CGGCATTGTC CAGGGTGGCA TGTACCAGGA CCTGCGCATG CGCTCGCTGG AAGGCCTGGA AAACATCGGT TTCGACGGCC TGGCCATTGG CGGCCTGTCG GTGGGCGAGC CCAAGCACGA AATGATCAAG GTGCTGGATT ACCTGCCGGA CCAGATGCCT GCTGACAAAC CTCGTTACCT TATGGGGGTA GGCAAACCGG AAGATCTCGT TGAGGGTGTG CGCCGCGGCG TCGACATGTT CGACTGCGTG ATGCCGACGC GTAACGCGCG CAACGGTCAT CTGTTCGTTG ATACAGGGGT GATCAAGATC CGCAATGCGT TCCATCGTCA CGATGAATCG CCGCTGGATC CGACCTGTGA CTGCTATACC TGCACCAACT TCTCGCGCGC CTATCTCCAT CATCTGGACA AATGCGGCGA AATGCTGAGC AGCATGCTGA ATACCATCCA CAACTTGCGC CATTATCAGC GCTTGATGGC CGGTTTACGC GAGGCTATTC AACAGGGTAA ATTGGCCGCC TTTGTCGACG CCTTCTACGC CAAGCGCGGG CTTCCTGTAC CGCCCTTGGA CTGA
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Protein sequence | MSRTCRMSFE LLATDGKARR GRITFPRGTV ETPAFMPVGT YGTVKGMLPR DIEAIGAEMI LGNTFHLWLR PGTEVIKKHN GLHDFMQWKG PILTDSGGFQ VFSLGAMRKI KEEGVTFASP VDGSKVFMGP EESMQVQRDL GSDVVMIFDE CTPYPAEHDV ARTSMELSLR WAQRSKNAHA DNTAALFGIV QGGMYQDLRM RSLEGLENIG FDGLAIGGLS VGEPKHEMIK VLDYLPDQMP ADKPRYLMGV GKPEDLVEGV RRGVDMFDCV MPTRNARNGH LFVDTGVIKI RNAFHRHDES PLDPTCDCYT CTNFSRAYLH HLDKCGEMLS SMLNTIHNLR HYQRLMAGLR EAIQQGKLAA FVDAFYAKRG LPVPPLD
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