| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0852 |
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| Symbol | |
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| ID | 5194536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 975069 |
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| End bp | 976364 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640585310 |
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| Product | phosphonate ABC transporter, inner membrane subunit |
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| Protein accession | YP_001266198 |
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| Protein GI | 148546096 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.539789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGTACG ATGCGCGGCT TGCTCAACCT GCTGTACCCC AGCGATGTAC CGGGGGCGCG
CCAGGCCTTG GCCGAGCTAG GCCTGGCCGA CAAGCTGTTC GTGCAGTGTG GGCAGTTGTC
CGGTGGCCAG TTGCAGCGGG TGGGCATTGC TCGGGCGTTG TACCAGCGTC CGCAGGTGCT
GCTGACCGAC GAACCGGTGT CGGCCATGGA CCCGGTGTTG GCCGACCACA GCCTGGCCGT
GCTCAATCGC CATGCCCAGG CCGCTGGCGT GACGTTGGTG GCGAGCCTGC ACGCCGTAGA
GTTGGCGCTG GCGCATTTTC CGCGGGTGAT AGGTATTCGG GAAGGGCAGG TTGTGTTCGA
CTGCCCGGCC GAAGCGGTCA CCGAGCAACT GCTGGACGCG CTATACGCCA ACGAACAACT
GGCTCCGCCG CCAACCCAGG GGCCGATCCT GACCGTGCAG ATTCCGCGAT GCTGAAGGCT
GACGCCCGCG ACCCGGCGCT GCTGCCGCGG TTGCTGCTGG CCCTGTTGGC GGTGGCAGTA
CTGTGGCCGG CTATCCAGAC AAGCGAACTG AACCCTGGGG TGCTGTTGCA GGCGGATAAT
CGTCAGCAGA TTGCCAGCTT CACCAGCGCC TTCTGGCCGC CGGCACATGA TGCCGATTTT
CTTGCACTGC TGTATGAAGC CACCTTGCAG ACCCTGGCCG TGGCGACTGC CGGCATGGCG
CTGGCGTTGT TGTTGGCGAT CCCGGCTGGC TTGCTGGCCA GCCGTGCCTT GTCCTTGCGT
GCTGCTTCAC GCGGCAGGCG GGCCGGGTTC TGGTCGCGAC TGTTGCGCCT GCCGGTGCGT
GGGCTGCTGA TTTTCCTGCG TAGCGTGCCG GAGATCGTCT GGGCGTTGCT GTTCGTGCGC
GCCGTGGGGC TGGGACCGAC GGCGGGCGTA CTGGCTATCG CCATCACCTA CAGTGGCATG
CTCGGCAAGG TTTACGCCGA AATCTTCGAG TCGGTCGACC AGCGCCCGGC GCATGCCTTG
TTGCAGGCGG GCAGTGGCCG GCTGGCGGCG TTTTTCTACG GCATCCTGCC CAATGCTGCC
TCCGAAGTGG TGTCGTACAC CGTGTACCGC TGGGAGTGCG CGGTGCGGGC TTCGGTGGTG
ATGGGCTTTG TCGGTGCTGG CGGGCTGGGC CAGCAGATCG ACCTGTCGAT GCGCATGTTT
GCGGGTGCGC AAGTGGCGAG CATGCTGTTG ACGTTCTTGC TGCTGGTGAT CCTGGCCGAC
CTGCTCAGCC GCCTGCTGCG CTGGAGACTG GCATGA
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| Protein sequence | MGYDARLAQP AVPQRCTGGA PGLGRARPGR QAVRAVWAVV RWPVAAGGHC SGVVPASAGA
ADRRTGVGHG PGVGRPQPGR AQSPCPGRWR DVGGEPARRR VGAGAFSAGD RYSGRAGCVR
LPGRSGHRAT AGRAIRQRTT GSAANPGADP DRADSAMLKA DARDPALLPR LLLALLAVAV
LWPAIQTSEL NPGVLLQADN RQQIASFTSA FWPPAHDADF LALLYEATLQ TLAVATAGMA
LALLLAIPAG LLASRALSLR AASRGRRAGF WSRLLRLPVR GLLIFLRSVP EIVWALLFVR
AVGLGPTAGV LAIAITYSGM LGKVYAEIFE SVDQRPAHAL LQAGSGRLAA FFYGILPNAA
SEVVSYTVYR WECAVRASVV MGFVGAGGLG QQIDLSMRMF AGAQVASMLL TFLLLVILAD
LLSRLLRWRL A
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