| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0839 |
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| Symbol | |
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| ID | 5191199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 961288 |
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| End bp | 962175 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585297 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001266185 |
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| Protein GI | 148546083 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.389317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.792508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTA AGCACTTTAT CCAAATCACC AAACCGGGGA TCATTTTCGG TAACGTGCTT
TCCGTGGCAG GCGGTTTCTT CCTTGCCTCG AAGGGCCATG TGGATTTCGC CCTGTTCCTG
GCGGTGGTGA TCGGTACTTC GCTGGTGGTT GCGTCCGGAT GCGTGTTCAA CAACTGCATC
GACCGTGACA TCGACCACAA GATGGAGCGC ACCAAGAACC GCGTCATGGT CCAGGGCGGC
ATGTCGCTGC CCCTCGCGCT GATCTACGCC ACCCTGCTCG GGGTGGCGGG TTTCAGCCTG
CTGTATGTCC AGGCCAACCC GCTGTCTGCG TTCTGCGCAC TGATTGGCTT TGTCGTCTAT
GTCGGTTTCT ACAGCCTGTG GCTGAAGCGT AAATCGGTGC ACGGCACCTT GGTCGGCAGC
CTGTCCGGTG CCATGCCTCC GGTGATCGGC TACTGCGCCG TGAGCAACAG CTTCGACCTG
GCTGCGGTAA CCCTGCTGGT GATGTTCAGC CTTTGGCAAA TGCCGCACAG CTTTGCCATC
GCGATCTTCC GCTTCAAGGA TTACAGCGCT GCCAACATTC CGGTCCTGCC GGTGGCACGT
GGCATCCTCG CGGCGAAGAA GCAGATTGTG CTGTACGTGC TGGCCTTTGT GCTCGCCACC
TTGATGCTCA CCCTCGGCGG TTACGCCGGC CTCGGCTACC TGGCCGTGGC AGCAGCCATG
GGCCTGTACT GGCTGTACAT GGCCTGGGGT GGTTACAAGG CCGAGGACGA CAGCAAGTGG
GCCCGCAAGG TGTTCGGCTT CTCCATCCTT ACCGTCACTG CCCTGAGCGT GATGATGGGG
GTGGACAGCC AGACCGCTGC GGATGTGCTG ATGACCTACG CACGCTGA
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| Protein sequence | MSVKHFIQIT KPGIIFGNVL SVAGGFFLAS KGHVDFALFL AVVIGTSLVV ASGCVFNNCI
DRDIDHKMER TKNRVMVQGG MSLPLALIYA TLLGVAGFSL LYVQANPLSA FCALIGFVVY
VGFYSLWLKR KSVHGTLVGS LSGAMPPVIG YCAVSNSFDL AAVTLLVMFS LWQMPHSFAI
AIFRFKDYSA ANIPVLPVAR GILAAKKQIV LYVLAFVLAT LMLTLGGYAG LGYLAVAAAM
GLYWLYMAWG GYKAEDDSKW ARKVFGFSIL TVTALSVMMG VDSQTAADVL MTYAR
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