| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0837 |
|---|
| Symbol | |
|---|
| ID | 5195072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 960318 |
|---|
| End bp | 960944 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640585295 |
|---|
| Product | cytochrome o ubiquinol oxidase, subunit III |
|---|
| Protein accession | YP_001266183 |
|---|
| Protein GI | 148546081 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | [TIGR02842] cytochrome o ubiquinol oxidase, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.900518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.737188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGTC AAGTAATGCA CGGCGGCGCT GCTCATGGTC ACGACCATGG GCATGACGAC
CACCACCACG ACTCGGGCCA GATGACCGTA CTGGGCTTCT GGCTGTACCT GATGACCGAC
TGCATCCTGT TTGCGTCGCT CTTCGCCACC TACGCGGTGC TGTCCGGCAG TTTTGCCGGC
GGCCCGTCGG GTCATGACAT CTTCCAGCTC GATTTCGTAG CTGTTGAAAC GCTGTTCCTG
CTGCTGTCCT CGATCACCTT CGGCTTCGCC ATGCTGAAGA TGTTCGATGG CAAGAAAGCA
GGTGTACTGG GCTGGTTGGC TGTGACCTTC CTGTTCGGTG CAGGCTTCAT CGCGATGGAG
ATCTATGAGT TCCATCACCT GATCAGCGAG GGCTTCGGCC CGCAGCGCAG TGGCTTCCTG
TCGGGCTTCT TCGCCCTGGT AGGTACCCAC GGTCTGCACG TGACTGCTGG TCTGATCTGG
ATGGCAATCA TGATGTACCA GATCAACAAG CACGGCATCA CGCCGACCGC CAAGACCCGC
ATGAGCTGCC TGAGCCTGTT CTGGCACTTC CTGGACGTGG TCTGGATCTG CGTATTCACC
GTCGTTTACC TGCTGGGGGT TCTGTAA
|
|---|
| Protein sequence | MSSQVMHGGA AHGHDHGHDD HHHDSGQMTV LGFWLYLMTD CILFASLFAT YAVLSGSFAG
GPSGHDIFQL DFVAVETLFL LLSSITFGFA MLKMFDGKKA GVLGWLAVTF LFGAGFIAME
IYEFHHLISE GFGPQRSGFL SGFFALVGTH GLHVTAGLIW MAIMMYQINK HGITPTAKTR
MSCLSLFWHF LDVVWICVFT VVYLLGVL
|
|---|
| |