| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0831 |
|---|
| Symbol | |
|---|
| ID | 5195570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 952939 |
|---|
| End bp | 954495 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640585290 |
|---|
| Product | anaerobic nitric oxide reductase transcription regulator |
|---|
| Protein accession | YP_001266178 |
|---|
| Protein GI | 148546076 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAC AGCCACTGCT CACCACCCTC CTGCCCCTGG TCAGCGACCT GTCCCGCGAT
TTGCCCGACC AGGAACGCTA CCGCCGCCTG TTGCAAGCCA TGCGTGGCCT GCTGCCGTGC
GATGCTGCAG CACTGCTGCG GCTGGACGGG GAATGGCTGG TGCCGCTGGC AGTGGATGGC
CTTAGCCCCG ACACCCTCGG CCGGCGCTTT CGGGTCAGCG AGCACCCGCG TTTCCAGATA
CTGCTCAGCC GCCCGGAACC CACCCGTTTC GCCAGCGATT CCGAACTGCC CGACCCCTAC
GATGGTTTGG TCAATGCCCC CGATGCCGAC CTTGAAGTGC ACGACTGCAT GGGCTGCCCG
TTGATGGTCG ATGAGCGCCC ATGGGGCCTG GTCACCCTCG ACGCCCTCAC CCCCGGGCAG
TTCCAGAGCC TGGAGCTGGA TGCCCTGCAG GCCTTTGCCA GCCTGGCTGC CGCCACCGTT
ACCGTGGCCG AGCGTATCGA GCACCTGGCC CTGCGCGCCG AAGACGAACA CCATCGCGCC
GAGCTCTACC GCCAGGCCAG CGGCCAGGAT AGAGAGCTGA TTGGCCAGAG CGCCGCGCAC
AAACGCCTGG TGGAGGAAAT TCGTCTGGTC GGCAGCAGCG ACCTGACCGT GCTGATCACC
GGCGAAACCG GGGTTGGCAA GGAGCTGGTG GCCCAGGCCC TGCACCAGGC CAGTAACCGC
GCCGACAAGC CGCTGGTCAG CCTCAACTGC GCCGCCCTGC CCGACACCTT GGTGGAAAGC
GAACTGTTCG GCCATGTGCG CGGCGCCTTC ACCGGCGCGC ATGGCGAGCG CCGCGGCAAG
TTCGAACTGG CCAACGGCGG CACGCTGTTC CTCGACGAAG TGGGCGAACT GCCGCTGACG
GTGCAGGCGA AACTGCTACG CGTGCTGCAA AGCGGCCAGC TGCAGCGCCT GGGTTCGGAC
CGCGAGCACC GGGTGGACGT GCGCCTGATC GCCGCTACCA ACCGCGACCT CGCTGCCGAG
GTGCGTACGG GCAACTTTCG CGCCGACTTC TATCACCGCC TCAGCGTTTA CCCGCTGCAC
GTGCCACCTT TGCGCGAACG TGGGCGAGAC GTGCTGCTAT TGGCGGGCTA CTTCCTCGAA
CAGAACCGTT CACGGCTGGG CCTGAACAGC CTGCGCCTGA GCCATGAGGC CCAAGCCGCG
TTGATCGCCT ACGACTGGCC AGGCAACGTG CGCGAACTGG AACACCTGAT CGGCCGCTCG
GCACTCAAGG CGCTGGGCCA GCACCCTGAT CGGCCACGTA TCCTCACCCT CGAAGCCATC
GACCTGGACC TGCGTGTGTC GGCAACCACG CCAGGCACGC TGCCCTCCCC TGCTGCACCG
CTGCAAGTGG TCACCCCGCC TGAAGGCGGC TTGCGTGAAG CCGTCGATAT TTACCAGCGA
CAGGTGATCG AAGCCTGCCT GCAGCGGCAT CAGGACAACT GGGCAGCAGC GGCCCGCGAA
CTCGGTCTGG ACCGCGCAAA CCTGAGCCGT TTGGCCCGCA GGCTAGGGCT TCGCTGA
|
|---|
| Protein sequence | MTTQPLLTTL LPLVSDLSRD LPDQERYRRL LQAMRGLLPC DAAALLRLDG EWLVPLAVDG
LSPDTLGRRF RVSEHPRFQI LLSRPEPTRF ASDSELPDPY DGLVNAPDAD LEVHDCMGCP
LMVDERPWGL VTLDALTPGQ FQSLELDALQ AFASLAAATV TVAERIEHLA LRAEDEHHRA
ELYRQASGQD RELIGQSAAH KRLVEEIRLV GSSDLTVLIT GETGVGKELV AQALHQASNR
ADKPLVSLNC AALPDTLVES ELFGHVRGAF TGAHGERRGK FELANGGTLF LDEVGELPLT
VQAKLLRVLQ SGQLQRLGSD REHRVDVRLI AATNRDLAAE VRTGNFRADF YHRLSVYPLH
VPPLRERGRD VLLLAGYFLE QNRSRLGLNS LRLSHEAQAA LIAYDWPGNV RELEHLIGRS
ALKALGQHPD RPRILTLEAI DLDLRVSATT PGTLPSPAAP LQVVTPPEGG LREAVDIYQR
QVIEACLQRH QDNWAAAARE LGLDRANLSR LARRLGLR
|
|---|
| |