| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0824 |
|---|
| Symbol | |
|---|
| ID | 5192576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 921584 |
|---|
| End bp | 922318 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640585283 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001266171 |
|---|
| Protein GI | 148546069 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0727] Predicted Fe-S-cluster oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.131616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.401715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACC GCTTACGTTT CGGCTGTACC GGCTGCGGCA AATGCTGCAC CGGCCACCAT
GTGCCACTGA CGCTGGCCGA AGCGCGTCGC TGGGCGGACG ATGCCGGCCA GGTGGTGGTA
CTGATCGAGG CCTTCGTCGT GGACGGCCCC GGCATGCCGC TGGAGCAGCG TGACCATGTG
CTGCGACGCT CCCATCCAGT GCATTGTGGC GAGGGCGAGG CACGCGTCTC GGTGACCTTT
GCTGCATTCA ACCCCGGACG TTGCCGTAAC CTCGACGCCA ACGACCTCTG CACCATCTAT
GAGCAGCGCC CGCTGGTGTG TCGCATCTAT CCGGTAGAAA TCAACCCGCA TATCCCGCTG
CGGCCAGACA GCAAAGACTG CCCGCCTGAG GCTTGGCAAC AGGGGCCGGA GCTGATTCAT
GGCGCGCAAC TGGTCGATGT GGAACTGCAG GCACTGGTAC AGGCTTCGCG CCAGGCCGAC
CGCGATGACA TTGCCGCCAA GGTGGCGGTG TGCCAGGCAT TGGGCATGAC GACCAGTGCG
CTCAAGGGGA ATGGGTTTAC CGCCTACTTG CCGGATATGG GGGCCTTTGC TGCGGCACTG
GCGCAGGTAC AGGGAAATGA AGCGGCACAG TGGACCTTGC ATGTGCAGGA TGAAGCGCTG
ACGGCAAGCT TGCAGGCACT GGGTTTGCGC ACAACCCATC AAACCCCGGT TTATTACGCC
TTTATCGGTT TCTAG
|
|---|
| Protein sequence | MTDRLRFGCT GCGKCCTGHH VPLTLAEARR WADDAGQVVV LIEAFVVDGP GMPLEQRDHV
LRRSHPVHCG EGEARVSVTF AAFNPGRCRN LDANDLCTIY EQRPLVCRIY PVEINPHIPL
RPDSKDCPPE AWQQGPELIH GAQLVDVELQ ALVQASRQAD RDDIAAKVAV CQALGMTTSA
LKGNGFTAYL PDMGAFAAAL AQVQGNEAAQ WTLHVQDEAL TASLQALGLR TTHQTPVYYA
FIGF
|
|---|
| |