Gene Pput_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0820 
Symbol 
ID5191599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp917455 
End bp917931 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID640585279 
Producthypothetical protein 
Protein accessionYP_001266167 
Protein GI148546065 
COG category 
COG ID 
TIGRFAM ID[TIGR02284] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.169744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC CCAACAAAGA CGTGATCGAC GTACTCAACG ACCTGATCGA GTACAGCAAG 
GATGGCGAGA AAGGTTTCAA GGCCTCGGCC GATGATGTTA AGAACCCCGA ACTGAAAGCG
TTCTTCGTCC AGCGTGCGGG TGAGTGCGCC AACGCTGCCA GTGAATTGCA GGGCGAAGTA
CGCCGCCTGG GCGGCGACCC GGAAACCTCT ACCAGCATCA GTGGCGACCT GCACCGCGGC
TGGGTCAACC TCAAGTCGAT GGTCACCGGC AAGGACGAAG AAGCCGTGCT GAACGAGGTG
GAGCGTGGCG AGGACCACGC CCTCAAGGCC TACAAGGAAG CCCGCGAAAA GCTGGTGAAA
CTGGGCCGCA CTGCCAGCGA CATGACCTAC AGCCTGGTGG AAAAGCAGCT GCAAGGCGTG
CAGCGCAACC ATGACCAGGT CAAGGCCCTG CGCAACGCTG CTCGCGCCCG CTCCTAA
 
Protein sequence
MSNPNKDVID VLNDLIEYSK DGEKGFKASA DDVKNPELKA FFVQRAGECA NAASELQGEV 
RRLGGDPETS TSISGDLHRG WVNLKSMVTG KDEEAVLNEV ERGEDHALKA YKEAREKLVK
LGRTASDMTY SLVEKQLQGV QRNHDQVKAL RNAARARS