| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0818 |
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| Symbol | |
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| ID | 5190307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 915095 |
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| End bp | 916837 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585277 |
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| Product | PTS system, fructose subfamily, IIC subunit |
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| Protein accession | YP_001266165 |
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| Protein GI | 148546063 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.229245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTG CCATAGTCAC CGCCTGCCCC AATGGCCAGG TATCGAGTGT ACTGAGTGCA
CGCTTGCTGT CCGCCGCCGC CCAGCGTCGC GGCTGGAGCA CCAGCGTCGA AGTGCAGAAT
ACTGAACACC CCGAGCGGCA ACTGAGCGCC GCACAGATCG CCGAGGCTGA CTGGGTGCTT
GTGGTCAGCA CCGGGCCGGT GGACCTGGCC CGCTTCGTCG GCAAGCGCCT GTACCAAAGC
ACGCCGTCCC AGGCGCTGGC TGATCGCGAA GGCTTTCTCG ACGAAGCGGC AGCCAACGCC
GAACTGCTGG CCGCTGTGAC AGGCACCCCC GCCGCAGTTG GCAGTGCTGG CGCTCGCATC
GTTGCCGTCA CTGCATGCCC GACCGGCGTA GCCCATACCT TCATGGCCGC AGAAGCCTTG
CAGCAAGCCG CACAGCAACT GGGCTACCAG TTGACCGTCG AGACCCAGGG CTCGGTCGGT
GCGCGCAATC CCTTGTCTGC TGAAGCCATC GCAGCGGCGG ACGTGGTGCT GCTGGCCGCC
GACATTGAAG TACCCACTGC ACGTTTCGCC GGCAAACGTA TTTACCGTTG TGGTACTGGC
ATTGCCCTCA AGCAGGCCCG CGCTACCCTG GACAAAGCCC TGGCGCAGGC CTCGGTGGAA
AACGGTGCCG ACGCTGCAGC GGCGACCACG CCGGCCAAGG GCGAGAAAAC CGGCGTGTAC
AAGCACTTGC TGACCGGTGT GTCGTTCATG CTGCCGATGG TGGTGGCCGG CGGTCTGCTG
ATTGCCCTGT CGTTCGTGTT CGGTATCGAG GCCTACAAAG AGGCGGGCAC CTTGCCGGCG
GCGTTGATGC AGATTGGCGG TGAAGCCGCC TTCAAACTGA TGGTTCCGCT ACTGGCAGGC
TATATCGCCT GGTCCATCGC CGACCGCCCC GGGCTGGCCC CGGGCATGAT CGGCGGCCTG
TTGGCCAGCA CCTTGGGGGC CGGCTTTATC GGTGGCATCG TCGCCGGTTT CCTCGCCGGT
TACAGCGCCA AGGCCATTGC CCGATGGGCG CGCTTGCCCA GCAGCCTGGA GGCGCTCAAG
CCGATCCTTA TCATTCCATT GCTGGCCAGT CTGTTCACCG GCCTGGTGAT GATTTACGTG
GTCGGCCAGC CGGTAGCGGC GATGCTCGAA GGCCTGACGC ACTTCCTCGA CAGCATGGGC
ACCACCAATG CCATCCTGCT GGGGCTGTTG CTGGGCGGCA TGATGTGCGT CGACCTTGGC
GGGCCGATCA ACAAGGCCGC CTATGCGTTC TCGGTGGGGC TGTTGGCCTC ATCGAGCTAC
GCGCCAATGG CGGCGACCAT GGCCGCCGGC ATGGTGCCGC CGATTGGCTT GGGTATCGCC
ACCTTCCTAG CCCGGCGCAA GTTTGCTCAG AGCGAGCGCG AGGCGGGCAA GGCGGCGCTG
GCGCTGGGGC TGTGCTTCAT CTCCGAGGGG GCGATTCCGT TTGCCGCCAA GGACCCGTTG
CGGGTGATCC CGGCCAGTAT CGCCGGTGGT GCGCTGACCG GGGCGTTGTC GATGTATTTT
GGCTGCAAGC TGATGGCGCC GCATGGCGGC TTGTTCGTGT TGTTGATCCC CAACGCGATC
AACCATGCGT TGCTGTATTT GCTGGCGATT GTGGCGGGTA GCCTGGTGAC AGCGGTGGTG
TATGCGGTTA TCAAGAAGAG CGAGCGTGTG GAGTTGGCCG TGGCGCCTGC TAAAAGTGTC
TGA
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| Protein sequence | MNIAIVTACP NGQVSSVLSA RLLSAAAQRR GWSTSVEVQN TEHPERQLSA AQIAEADWVL
VVSTGPVDLA RFVGKRLYQS TPSQALADRE GFLDEAAANA ELLAAVTGTP AAVGSAGARI
VAVTACPTGV AHTFMAAEAL QQAAQQLGYQ LTVETQGSVG ARNPLSAEAI AAADVVLLAA
DIEVPTARFA GKRIYRCGTG IALKQARATL DKALAQASVE NGADAAAATT PAKGEKTGVY
KHLLTGVSFM LPMVVAGGLL IALSFVFGIE AYKEAGTLPA ALMQIGGEAA FKLMVPLLAG
YIAWSIADRP GLAPGMIGGL LASTLGAGFI GGIVAGFLAG YSAKAIARWA RLPSSLEALK
PILIIPLLAS LFTGLVMIYV VGQPVAAMLE GLTHFLDSMG TTNAILLGLL LGGMMCVDLG
GPINKAAYAF SVGLLASSSY APMAATMAAG MVPPIGLGIA TFLARRKFAQ SEREAGKAAL
ALGLCFISEG AIPFAAKDPL RVIPASIAGG ALTGALSMYF GCKLMAPHGG LFVLLIPNAI
NHALLYLLAI VAGSLVTAVV YAVIKKSERV ELAVAPAKSV
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