| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0813 |
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| Symbol | |
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| ID | 5190355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 908364 |
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| End bp | 909194 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585272 |
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| Product | signaling modulator of AmpD, AmpE |
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| Protein accession | YP_001266160 |
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| Protein GI | 148546058 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.17689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC TGGTGTTGGT GCTGGCGCTG TGGGTCGAGA AGTTTTCGGC GCTGCGCCAT
AAGGTGCAGC GTGACGGGTT CTTTCTTGGT GAACTGGTGC GCCTGGAGCG CAGTGGCAAG
GTGCACCCGT GGTGGACGTT GGCCATCCTG GTGTTGGCGC CGGTAGCGCT GCTGGTGTTG
CTGCTGCATG TGCTGGAGCC GGTGGCGTAT GGTTTGCTGG CGTTGCCGGT GCACCTGCTG
GTGCTGATCT ACAGCCTGGG CCGCGGCGAT GCCAAGGCAT CGTTGGGGGC GTTTCGTGAT
GCCTGGCGGC GGGGGGACGA TCAGGCGGCG CTGCACGTAG CCGAGCGCGA CCTGGGCCTG
GTGGCCGATG AACCGCACAG CTTGCTGGTG CGGGTGCAGG GTAACTTGCT GTGGCAGGTG
TACCAGGGCT TTTTTGCGGT GATCTTCTGG TATTTCGTAC TGGGCCCTGG CGCAGCGCTG
GCTTATCGAT TGTTGGCGCT GTGTAGTGAG CACAGCAAGC AGCCGGCTTT GAAGGCGCGT
GCCGAGCAGT TGCGGCACAT CATGGACTGG TTGCCGGTGC GGGCGCTGGC GTTGAGCTTT
GCCCTGGTGG GCAACTTCCT CGCGGTGACA CGGGTGATGC TGCACGAGGT GCTCAACTGG
CACATCAGCG CCGGGCACCT GGTGGCTCGG GTGGGGCGGA TTGCCGATGA CATTCCCGAG
GAGGAGGACA GCCAGCGCGG GTTGGGGCGG CTGGACAGCC TGTGGGAATT GCTGTTGCGC
TGTGCAGTGC TGTGGTATGC CGGGTTCGCG CTGTGGACCG TGCTGGTCTG A
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| Protein sequence | MSFLVLVLAL WVEKFSALRH KVQRDGFFLG ELVRLERSGK VHPWWTLAIL VLAPVALLVL
LLHVLEPVAY GLLALPVHLL VLIYSLGRGD AKASLGAFRD AWRRGDDQAA LHVAERDLGL
VADEPHSLLV RVQGNLLWQV YQGFFAVIFW YFVLGPGAAL AYRLLALCSE HSKQPALKAR
AEQLRHIMDW LPVRALALSF ALVGNFLAVT RVMLHEVLNW HISAGHLVAR VGRIADDIPE
EEDSQRGLGR LDSLWELLLR CAVLWYAGFA LWTVLV
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