Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0812 |
Symbol | |
ID | 5194531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 907795 |
End bp | 908367 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585271 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_001266159 |
Protein GI | 148546057 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.961727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.164227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGG ACCGTGCCAC AGGCTGGTTC CACGGAATCG GAATCACCCA CTGCCCCTCG CCGAACTTCA ATGCGCGCCC CGAAGGCGAA TCGATTTCCC TGCTGGTGAT CCACAACATC AGCCTGCCCC CGGCCTGTTT CGGCACGGGC AAGGTGCAGC AATTCTTCCA GAACCGCCTG GCCCCTGATG AACACCCGTA TTTTGCCAGC ATCACCCACC TGACCGTGTC GGCGCACCTG TTCGTCGAGC GTGACGGCGC GGTGACGCAG TTCGTGTCGT TGCATGACCG TGCCTGGCAT GCGGGTGTGT CGAGCTTTGA CGGGCGCGAA GGCTGTAACG ACTTTTCCAT CGGCATCGAA CTGGAAGGCA CCGACGACCT GCCCTATACC GATGCCCAGT ATGCGGTGCT GGAGCAACTC ACCCGGCACA TCCGCAGTGC CTGGCCGGCC ATCGACCTGA ACCGCATTCA GGGCCACAGC GACATTGCCC CGCAGCGCAA GACCGACCCC GGCCCGGCCT TCGACTGGCC GCGCTACCGC CAGGCGCTGC AGCACAACGA GGACAAGGCA TGA
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Protein sequence | MQLDRATGWF HGIGITHCPS PNFNARPEGE SISLLVIHNI SLPPACFGTG KVQQFFQNRL APDEHPYFAS ITHLTVSAHL FVERDGAVTQ FVSLHDRAWH AGVSSFDGRE GCNDFSIGIE LEGTDDLPYT DAQYAVLEQL TRHIRSAWPA IDLNRIQGHS DIAPQRKTDP GPAFDWPRYR QALQHNEDKA
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