Gene Pput_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0810 
Symbol 
ID5195201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp904461 
End bp905309 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID640585269 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_001266157 
Protein GI148546055 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.182646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0443803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACC TACGCCTTGC CGACCTGACC GCTGAAATTG AAGCCAACGT GCGCCGCGCG 
CTGTTGGAGG ACATCGGCAG TGGCGATATC ACCGCGCAAC TGATCCCGGC CGAGCGCCTG
GCCAAGGCGA CCATCATCAC CCGTGAAAAC TGCGTGGTCG CCGGTACCGC CTGGGTCGAT
GCCGTATTCC GCCAGCTCGA CCCGCGCGTT GCAGTGCACT GGCAGGTGGC CGACGGTGAG
CAGGCCACTG CCAATCAGCC GTTGTTCCAC CTGGAAGGCC CGGCCCGTTC GCTGCTCAGT
GGGGAGCGCA GCGCACTGAA CTTCCTGCAG CTGCTGTCGG GGGTCGCCAC CCGTGCGCGC
TTCCTCGCCG ACCTGGTAGC CGGCACTCAG GTGCGCCTGC TGGATACCCG CAAAACCCTG
CCGGGGCTTC GCCTGGCGCA AAAATACGCA GTGACCTGCG GTGGGTGCGA CAATCACCGC
ATAGGCCTGT ACGACGCCTT CCTGATCAAG GAAAACCACA TCGCCGCCAG CGGCGGCGTA
GCCGAGGCGG TGGCCGCAGC ACACCGCATT GCGCCGGGCA AGCCGGTGGA AATCGAGGTC
GAAAGCCTGG ACGAACTGCG CCAGGCGCTG GCCGCTGGCG CGGACATCAT CATGCTCGAC
GAGCTGAACC TGGAAGAAAT GCGCGAAGCC GTGCGCATTA CCGCTGGCAA AGCCAAACTT
GAAGCCAGCG GCGGGGTCAA CGAAACGACC CTGCGGGTGA TTGCCGAGAC AGGGGTGGAC
TACATCTCGA TTGGCGCCAT GACCAAGGAT GTGAAAGCGG TGGACCTGTC GATGCGACTG
AGCCTGTGA
 
Protein sequence
MPNLRLADLT AEIEANVRRA LLEDIGSGDI TAQLIPAERL AKATIITREN CVVAGTAWVD 
AVFRQLDPRV AVHWQVADGE QATANQPLFH LEGPARSLLS GERSALNFLQ LLSGVATRAR
FLADLVAGTQ VRLLDTRKTL PGLRLAQKYA VTCGGCDNHR IGLYDAFLIK ENHIAASGGV
AEAVAAAHRI APGKPVEIEV ESLDELRQAL AAGADIIMLD ELNLEEMREA VRITAGKAKL
EASGGVNETT LRVIAETGVD YISIGAMTKD VKAVDLSMRL SL