Gene Pput_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0802 
Symbol 
ID5193787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp896611 
End bp897093 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content60% 
IMG OID640585262 
Productperoxiredoxin 
Protein accessionYP_001266150 
Protein GI148546048 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.033017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAT TTCACGACCT GAAACTGGAA GCGCTGAACG GCGGAGAGCT GCCCCTCGCA 
CCCTTCAAGG GCCAAGTGGT GCTGGTGGTC AACGTCGCCT CCAAATGTGG CCTGACGCCG
CAATACAAGG CCCTGGAAAA CCTCTACCAG ATCTACAAGG ACAAGGGCTT CAATGTGCTT
GGCCTGCCGT GCAACCAGTT TGCCGGGCAG GAACCGGGTA GCGAAAAGGA AATCCAGGAC
TTCTGCAGCC TCAACTACGG GGTCAGCTTC CCGCTGGGGC GCAAGCTGGA TGTCAACGGG
CCGCAGCGCC ATTCGTTGTA CCGCCTGCTG GCAGGCGAGG GGGCCGAGTT CCCCGGTGAC
ATTACCTGGA ATTTCGAGAA GTTTCTGGTG GGCAAGGATG GCCGGGTGCT GGCGCGTTTC
TCACCCCGCA CGGCGCCGGA TGACCCGGCA GTGGTGCAGG CCATTGAAAA AGCACTGGTC
TGA
 
Protein sequence
MSAFHDLKLE ALNGGELPLA PFKGQVVLVV NVASKCGLTP QYKALENLYQ IYKDKGFNVL 
GLPCNQFAGQ EPGSEKEIQD FCSLNYGVSF PLGRKLDVNG PQRHSLYRLL AGEGAEFPGD
ITWNFEKFLV GKDGRVLARF SPRTAPDDPA VVQAIEKALV