Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0790 |
Symbol | |
ID | 5195411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 879831 |
End bp | 880796 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640585250 |
Product | glycerate dehydrogenase |
Protein accession | YP_001266138 |
Protein GI | 148546036 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.356534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCC CGCGTCGCGC CGTGTTTCTC GATCACCAGT CCCTGGACCT TGGCGACCTC GACCTTTCGC CCCTGAAGCA GCAGTTCGAC CAGTTCGAAC TGTTCGCCGC CACCCGCCCG GAACAGGTCG CGGAACGCTT GCAGGGCGCC GTGGCAGTGG TCAGCAACAA AGTCATGCTC GACGCCGCTA CCCTGGCTGC CAACCCGCAA CTGAAGCTGA TCCTGGTGGC CGCCACCGGC ACCAACAATG TCGACCTGGC CGCCGCCCGC GCCCAGGGCA TCACCGTGTG TAACTGCCAG GGCTACGGCA CGCCGTCTGT CGCCCAGCAT ACCCTGGCCC TGCTGTTGGC CCTGGCCACT CGGCTGTGCG ACTACAACCA GGCGGTGGCC GATGGCCAGT GGGCCAAGGC CAGCCAGTTC TGCCTGCTGG ACTTTCCTAT CGTCGAACTG GAGGGCAAAA CCCTCGGCCT GCTTGGCCAC GGTGAACTGG GCGGCGCAGT GGCGAGGCTG GCCGAAGCCT TCGGTATGCG TGTGCTGAGC GGGCAGATCC CTGGCCGCCC GGAGCGCGCC GACCGGCTGC CGCTGGACGA GTTGCTGCCG CAAGTCGATG CCCTGACCCT GCACTGCCCG CTGAACGAGC ACACCCGGCA TATGCTCGGT GCCCGCGAAC TGGCCCTGCT CAAGCCCAAC GCGCTGGTGG TCAACACCGC CCGTGGCGGC CTGATCGACG AACAGGCGTT GGCCGATGCC CTGCGCGGTG GTCACTTGGG CGGCGCGGCG ACCGACGTGC TGAGCGTGGA GCCGCCGGTC AACGGCAACC CGCTGCTGGA GCCCGGCATC CCGCGCCTGA TCATCACCCC GCACAGCGCC TGGGGTGCCG TAGAGTCGCG CCAGCGCATC GTCGGCCAGC TCAGTGAGAA CGCCCAGGCC TTCTTCGCCG GGCAGCCACG CCGCGTGGTC AGCTGA
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Protein sequence | MPSPRRAVFL DHQSLDLGDL DLSPLKQQFD QFELFAATRP EQVAERLQGA VAVVSNKVML DAATLAANPQ LKLILVAATG TNNVDLAAAR AQGITVCNCQ GYGTPSVAQH TLALLLALAT RLCDYNQAVA DGQWAKASQF CLLDFPIVEL EGKTLGLLGH GELGGAVARL AEAFGMRVLS GQIPGRPERA DRLPLDELLP QVDALTLHCP LNEHTRHMLG ARELALLKPN ALVVNTARGG LIDEQALADA LRGGHLGGAA TDVLSVEPPV NGNPLLEPGI PRLIITPHSA WGAVESRQRI VGQLSENAQA FFAGQPRRVV S
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