Gene Pput_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0772 
SymbolhemH 
ID5191137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp865362 
End bp866378 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content63% 
IMG OID640585232 
Productferrochelatase 
Protein accessionYP_001266120 
Protein GI148546018 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.491475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC ACGCCCTGCT GCTGGTCAAC CTGGGTTCCC CGGCCTCCAC CTCGGTGGCC 
GATGTGCGCC GTTACCTCAA CCAGTTCCTC ATGGACCCAT ACGTGGTCGA CCTGCCGTGG
CCGGTGCGGC GCTTGCTGGT GTCGCTGATC CTGATCAAGC GCCCAGAGCA GTCGGCACAC
GCCTACGCTT CGATCTGGTG GGAGGAGGGC TCGCCTCTGG TTGTGCTGAC CCGTCGCCTG
CAGGCAGCGA TGGTCGAGCA CTGGCCCCAT GGCCCAGTGG AAATTGCCAT GCGCTACGGC
CAGCCAGCGT TGCCTGATGT GTTGGAGCGG CTGGCCGCCC AAGGTGTGCG CAAGGTGACT
TTGGCGCCGC TTTATCCACA GTTCGCCGAC AGCACGGTGA CCACGGTGGT CGACCTGGCA
AAACAGACGG TCAGCGAGCG CCAGTTGCCG TTGCAGATGC GTGTGCTGCA GCCGTTCTAC
GAGCACCCGG CGTACATCGA GGCACTGGCT GCCAGTGCCC GGCCGCACCT TGAGACGGGT
TACGACCACC TGCTGCTGAG CTTCCATGGT TTGCCGGAGC GGCACCTGAA AAAGCTGTTT
CCGAAAGGGG TCAAGCACGA CCTGCGTGCT GCCGATTGCT GCCACGGTGC AACCGCCGAA
GTACGTTCGG TTTGCTATCG CGGGCAATGC CTGGCTACGG CCAAAGCCTT TGCGCAGAAA
ATGGGCATAC CTGATGGCAA GTGGTCGGTA TCGTTCCAGT CGCGACTGGG CCGGGACAAG
TGGATCGAAC CCTACACCGA GACGCGGTTG GATGAACTGG CCAAGGCCGG TGTGAAGAAG
CTGCTGGTGA TGTGCCCGGC GTTTGTGGCG GATTGCATCG AGACGCTGGA AGAGATAGGC
ATGCGTGGCA GCGAGCAGTT TGTCGAGGCG GGTGGCCGGG AGCTGGTGCT GGTGCCGTGC
CTGAATGATC ACCCGGAGTG GGTGAGGGTG TTGGCTGATA TGTGTGAAAA GGCCTGA
 
Protein sequence
MTDHALLLVN LGSPASTSVA DVRRYLNQFL MDPYVVDLPW PVRRLLVSLI LIKRPEQSAH 
AYASIWWEEG SPLVVLTRRL QAAMVEHWPH GPVEIAMRYG QPALPDVLER LAAQGVRKVT
LAPLYPQFAD STVTTVVDLA KQTVSERQLP LQMRVLQPFY EHPAYIEALA ASARPHLETG
YDHLLLSFHG LPERHLKKLF PKGVKHDLRA ADCCHGATAE VRSVCYRGQC LATAKAFAQK
MGIPDGKWSV SFQSRLGRDK WIEPYTETRL DELAKAGVKK LLVMCPAFVA DCIETLEEIG
MRGSEQFVEA GGRELVLVPC LNDHPEWVRV LADMCEKA