Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0769 |
Symbol | |
ID | 5190610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 862197 |
End bp | 863165 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585229 |
Product | hypothetical protein |
Protein accession | YP_001266117 |
Protein GI | 148546015 |
COG category | [S] Function unknown |
COG ID | [COG3272] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.416293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGACC CTTCCGCCCA CCGCAAGCCG CGTATCGCCA TCAGCGCCTG CCTGACCGGG CACAGCGTGC GCTACAACGG CGGCCACAAG GCCTCCGACC TGTGCCGTAA ACAGCTGGAA CAGCACTTCG ACTGGCTACC TGTGTGTCCG GAAGTGGCAA TCGGCCTGGG TGTTCCGCGC GACCCGATTC GCCTGGTCGG CAACCCCGAG CAACCCGAAG TGGTCGGCAC CCGCGACCCC GGCAAGGACC TGACCGACCC GCTGCGCACC TATGGCGAGC AGATGGCCAA CGAACTTGAC GACATCTGCG GCTACATCTT CATGCAGAAG TCACCTTCTT GCGGCCTGGA ACGGGTAAAG GTTTATCAGG ACAATGGCCA CCCGGCCGTG CATGGTGGGC GCGGCGTCTA TGCCCAGGCT TTCTGTGCAT TGCGCCCGGA CCTGCCAGTA GAGGAAGAAG GCCGCCTGCA TGACCCCGTG CTGCGCGAGA ACTTCATAAG CCGCGTTTAC GCCTACGCCG ACTGGCAGCG CCTGCTGGCC GAGGGCCTGA ACCGTGGCGC GCTGGTACGC TTTCATTCGC GCTACAAGTA TTTGCTGATG GCCAATAACC CCCAGGCCTA TCGCACCCTC GGCCGCCTGC TTGGCAGCAT GAGCAAGGCT GATGAACCAC AGAGCATCGG CCCGCGCTAT TTCAGCCAGC TGATGCAAGC CCTGCGCCGC TGCGCGAGCC GCGGCACCCA CAGTAACGTG CTGCAGCACC TGAGCGGTTA CTTCAAGGAT GCCCTGACGC AGCAGGACAA GGCCGAGTTG CAGGCAGTCA TCGGCCAATA CCAACAAGGC GTGGTACCAC TGGTAGTGCC ACTGACCTTG CTCAAACACC ATTTGCGCAA GCACCCAGAC CCCTACCTGC AGCAACAAGC CTACCTGCAG CCGCACCCCG AGAGCCTGGG CTTGCGCAAT GCGGTCTGA
|
Protein sequence | MHDPSAHRKP RIAISACLTG HSVRYNGGHK ASDLCRKQLE QHFDWLPVCP EVAIGLGVPR DPIRLVGNPE QPEVVGTRDP GKDLTDPLRT YGEQMANELD DICGYIFMQK SPSCGLERVK VYQDNGHPAV HGGRGVYAQA FCALRPDLPV EEEGRLHDPV LRENFISRVY AYADWQRLLA EGLNRGALVR FHSRYKYLLM ANNPQAYRTL GRLLGSMSKA DEPQSIGPRY FSQLMQALRR CASRGTHSNV LQHLSGYFKD ALTQQDKAEL QAVIGQYQQG VVPLVVPLTL LKHHLRKHPD PYLQQQAYLQ PHPESLGLRN AV
|
| |