Gene Pput_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0754 
Symbol 
ID5192102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp846334 
End bp846918 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content63% 
IMG OID640585213 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_001266102 
Protein GI148546000 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCA TCCAGTTGAT CGTTGGCCTG GGTAACCCCG GCCCCGAATA CGAACAGACC 
CGGCATAACG CAGGGGCTCT TTTCGTTGAA CGCCTTGCCA GCGCCCAGCG TGTTTCGCTG
ACCGCTGACA AAAAGTATTT CGGCCTGACG GCTAAATTCA GCCATCAGGG CAACGACGTT
CGTTTGTTGA TCCCCACCAC CTACATGAAC CGCAGCGGCC AGTCCGTAGC GGCCTTGGCC
AATTTCTTCC GCATCAAGCC GGAAGCGATA CTGGTGGCAC ACGACGAACT CGATCTGCCC
CCGGGCGTTG CCAAGCTCAA GCGCGGCGGC GGCCATGGTG GGCACAACGG CCTGCGCGAC
ATCATCGCGC AGCTCGGCAA CCAGAACGAC TTCCACCGCC TGCGGCTTGG CATCGGCCAC
CCGGGTGACG CCAAACTGGT ATCCAACTTC GTCCTGGGCC GCGCGCCGCG CGCCGAGCAG
GAGAAGCTCG ACGCCAGCAT CGATTTTGCC CTCGGCGTGC TGCCGGACGT GCTTGCCGGC
GATTTCGCCA AGGCGATGCG CGAGCTGCAC AGCCAGAAGG CCTGA
 
Protein sequence
MTAIQLIVGL GNPGPEYEQT RHNAGALFVE RLASAQRVSL TADKKYFGLT AKFSHQGNDV 
RLLIPTTYMN RSGQSVAALA NFFRIKPEAI LVAHDELDLP PGVAKLKRGG GHGGHNGLRD
IIAQLGNQND FHRLRLGIGH PGDAKLVSNF VLGRAPRAEQ EKLDASIDFA LGVLPDVLAG
DFAKAMRELH SQKA