Gene Pput_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0749 
Symbol 
ID5192444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp839682 
End bp841196 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content65% 
IMG OID640585208 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_001266097 
Protein GI148545995 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACC GCTGCTGTGG CCTGGGGCTG CTGATGGTGC TGGCCGGTTG CACCCAGGTC 
GGCCCGGATT ATGAAAAGCC CCAAACGCCG TGGTTGGGCG GCTGGAGCAC GCCAATGCTG
GAGCAGGCCG GGCGCAGCGC GGCGGCGCCC GACCTGCGCC AGTGGTGGGC AGTGTTTGCC
GACCCAACGT TGGACGCGCT GATAGCCGAG GCCGACGCCA ACAACACCAA CCTGCGCGTG
GCTGGCCTGC GTATCGCTGA AGCCCGTGCC CAGTTGGCCA TCGTGCAGAC CGGGCGTTAT
CCGCAGCTGC AGCAACTGAG CGCACAAAGC CTGTACCTGA AGCAGGATCA GTCTGGTACG
CCTTCGGCCC GTGATTCGGT GTTCTGGCAA TCCAGCGTGG GCTTCGACAT CGGCTGGGAA
ATTGACTTCT GGGGCCGCTT CAGTCGCGCC ATCGAAAGCG CCGATGCCGT CTATTTCGCC
TCCCAGGCCA ACTACGCCGA TGCCATGCTG CTGCTACGTG CGCAGGTGGC CGACACCTAC
TTTGCCCTGC GCACTGCCGA AGCGCGGCTG GCTATTGCAC AAGAGAACGC CAAGCGCCAG
GCGCGTAGCC TGGAGATCAC CGAGCGGTTG TTCCGCCACG GTGAAAATGA CGAACTCGAC
TGGCAGCAGG CGCGTACTCA ATACCTGGCG ACCCAGGCCA CCATTCCCGA GTTCGAGAAC
CAGCTCAATG CCCTGCGCAA TGTGCTGTGT TCGCTGCTCG GCCGCCCGCC TGGGCCGCTG
CCGCAGCTGG CGGCCGGCCA TGGCCAACTG CCCTTGCCCA ACCGGGCAGT GTTGCAGGAT
GTACCGGCCA GCCTGCTGCA GCGCCGCCCG GACATCCGTG CCGCCGAGCA GGCAGTGGCG
GCGCAGTCGG CGCTGGTCGG GGTGGCCGAG GCCGATCTTT ATCCACAGCT GAGCTTGCTC
GGCAGTATCG GCTGGACCTT TCTATCGGCC AATCATCTGC CTGACACCTT CGACCTGGTG
GCTGGCCCAA GCCTGATCTG GAACCCGTTC GACTATGGCC GGCGCAAGAA CACCGTACGC
GTGGAAGATG CCCGCTTGCA GCAACTGATC GAGTTGTACC AGCAGGGCGT GCGCGAAGCC
GCCCGTGAGG CCGACGATGC TGCCAGCGGG TTGGTGCGCT CGCTGCAGAG TGCAACCATT
CGCGAGCAGG CCTCTCAGGC TGCGCAGCGC TCGCTGAATC TGGCCAGCTC GCAATACCGC
GAAGGCTTCG CTGATTTTCA ACGGGTGCTC GATGCTCAGC AACTGCTGTT GCAGCAACAG
GACGGTTACC TGGTCAGCCG TGGCAACGCG GTCAGCAGCC TGGTGACGTT GTACAAGGCC
CTGGGTGGTG GTTGGGACGC CAGCCGCGCG CCGATCGACC CGGCGACCCG CCAGCAAATG
CAGCAACGCA CCGACTGGGG CGAGTTGCTC GACGAGCCAG CCCCCACCGC GCATGCACAA
GGTGAAACCG AATGA
 
Protein sequence
MPNRCCGLGL LMVLAGCTQV GPDYEKPQTP WLGGWSTPML EQAGRSAAAP DLRQWWAVFA 
DPTLDALIAE ADANNTNLRV AGLRIAEARA QLAIVQTGRY PQLQQLSAQS LYLKQDQSGT
PSARDSVFWQ SSVGFDIGWE IDFWGRFSRA IESADAVYFA SQANYADAML LLRAQVADTY
FALRTAEARL AIAQENAKRQ ARSLEITERL FRHGENDELD WQQARTQYLA TQATIPEFEN
QLNALRNVLC SLLGRPPGPL PQLAAGHGQL PLPNRAVLQD VPASLLQRRP DIRAAEQAVA
AQSALVGVAE ADLYPQLSLL GSIGWTFLSA NHLPDTFDLV AGPSLIWNPF DYGRRKNTVR
VEDARLQQLI ELYQQGVREA AREADDAASG LVRSLQSATI REQASQAAQR SLNLASSQYR
EGFADFQRVL DAQQLLLQQQ DGYLVSRGNA VSSLVTLYKA LGGGWDASRA PIDPATRQQM
QQRTDWGELL DEPAPTAHAQ GETE