Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0749 |
Symbol | |
ID | 5192444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 839682 |
End bp | 841196 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585208 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001266097 |
Protein GI | 148545995 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACC GCTGCTGTGG CCTGGGGCTG CTGATGGTGC TGGCCGGTTG CACCCAGGTC GGCCCGGATT ATGAAAAGCC CCAAACGCCG TGGTTGGGCG GCTGGAGCAC GCCAATGCTG GAGCAGGCCG GGCGCAGCGC GGCGGCGCCC GACCTGCGCC AGTGGTGGGC AGTGTTTGCC GACCCAACGT TGGACGCGCT GATAGCCGAG GCCGACGCCA ACAACACCAA CCTGCGCGTG GCTGGCCTGC GTATCGCTGA AGCCCGTGCC CAGTTGGCCA TCGTGCAGAC CGGGCGTTAT CCGCAGCTGC AGCAACTGAG CGCACAAAGC CTGTACCTGA AGCAGGATCA GTCTGGTACG CCTTCGGCCC GTGATTCGGT GTTCTGGCAA TCCAGCGTGG GCTTCGACAT CGGCTGGGAA ATTGACTTCT GGGGCCGCTT CAGTCGCGCC ATCGAAAGCG CCGATGCCGT CTATTTCGCC TCCCAGGCCA ACTACGCCGA TGCCATGCTG CTGCTACGTG CGCAGGTGGC CGACACCTAC TTTGCCCTGC GCACTGCCGA AGCGCGGCTG GCTATTGCAC AAGAGAACGC CAAGCGCCAG GCGCGTAGCC TGGAGATCAC CGAGCGGTTG TTCCGCCACG GTGAAAATGA CGAACTCGAC TGGCAGCAGG CGCGTACTCA ATACCTGGCG ACCCAGGCCA CCATTCCCGA GTTCGAGAAC CAGCTCAATG CCCTGCGCAA TGTGCTGTGT TCGCTGCTCG GCCGCCCGCC TGGGCCGCTG CCGCAGCTGG CGGCCGGCCA TGGCCAACTG CCCTTGCCCA ACCGGGCAGT GTTGCAGGAT GTACCGGCCA GCCTGCTGCA GCGCCGCCCG GACATCCGTG CCGCCGAGCA GGCAGTGGCG GCGCAGTCGG CGCTGGTCGG GGTGGCCGAG GCCGATCTTT ATCCACAGCT GAGCTTGCTC GGCAGTATCG GCTGGACCTT TCTATCGGCC AATCATCTGC CTGACACCTT CGACCTGGTG GCTGGCCCAA GCCTGATCTG GAACCCGTTC GACTATGGCC GGCGCAAGAA CACCGTACGC GTGGAAGATG CCCGCTTGCA GCAACTGATC GAGTTGTACC AGCAGGGCGT GCGCGAAGCC GCCCGTGAGG CCGACGATGC TGCCAGCGGG TTGGTGCGCT CGCTGCAGAG TGCAACCATT CGCGAGCAGG CCTCTCAGGC TGCGCAGCGC TCGCTGAATC TGGCCAGCTC GCAATACCGC GAAGGCTTCG CTGATTTTCA ACGGGTGCTC GATGCTCAGC AACTGCTGTT GCAGCAACAG GACGGTTACC TGGTCAGCCG TGGCAACGCG GTCAGCAGCC TGGTGACGTT GTACAAGGCC CTGGGTGGTG GTTGGGACGC CAGCCGCGCG CCGATCGACC CGGCGACCCG CCAGCAAATG CAGCAACGCA CCGACTGGGG CGAGTTGCTC GACGAGCCAG CCCCCACCGC GCATGCACAA GGTGAAACCG AATGA
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Protein sequence | MPNRCCGLGL LMVLAGCTQV GPDYEKPQTP WLGGWSTPML EQAGRSAAAP DLRQWWAVFA DPTLDALIAE ADANNTNLRV AGLRIAEARA QLAIVQTGRY PQLQQLSAQS LYLKQDQSGT PSARDSVFWQ SSVGFDIGWE IDFWGRFSRA IESADAVYFA SQANYADAML LLRAQVADTY FALRTAEARL AIAQENAKRQ ARSLEITERL FRHGENDELD WQQARTQYLA TQATIPEFEN QLNALRNVLC SLLGRPPGPL PQLAAGHGQL PLPNRAVLQD VPASLLQRRP DIRAAEQAVA AQSALVGVAE ADLYPQLSLL GSIGWTFLSA NHLPDTFDLV AGPSLIWNPF DYGRRKNTVR VEDARLQQLI ELYQQGVREA AREADDAASG LVRSLQSATI REQASQAAQR SLNLASSQYR EGFADFQRVL DAQQLLLQQQ DGYLVSRGNA VSSLVTLYKA LGGGWDASRA PIDPATRQQM QQRTDWGELL DEPAPTAHAQ GETE
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