| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0748 |
|---|
| Symbol | |
|---|
| ID | 5192443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 838581 |
|---|
| End bp | 839678 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640585207 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001266096 |
|---|
| Protein GI | 148545994 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCGA GTTTCAAGCT GGACAGCGCC CTTTCGCGGG GCTTGCTCGA TGTGCTCATC
AAGGCCGGTC TGGTGGCAGC CTTGGTGATC TTCGCTTTCC AGGTGTTTCA GCCGTTCCTG
GAGTTGATGA TGTGGGCGGT GATCCTGGCG GTTACGTTGT ACCCGTTGCA TTGCCGTATC
CAGCGCCGCA CCGGGCTCAA GCAAGGCTAT GTGGCGACGC TGGTGGTGCT ACTGGTTCTG
GTGCTGCTGC TGGTGCCTAT CTACCTGGTG ATGATGTCGA TTGGCGAATC GGTGGACAGC
CTGGTGACGC TACTCAAGAG CGGCGCCTGG AGCGTGCCGG TCCCGCCTGA TTCCGTGGCG
ACCTGGCCAC TGATCGGGCC GAAGGTGCAT GCGCTGTGGT TGGCGGCCTC CGAAAACATG
GCCAGTGTGC TGAATCAGTG GATGCCCCAG ATCAAGGGGG CCGGGCTAAC GGTGCTGGGC
GCTGCGGCCA GCGCCGGTGG GGCTTTCCTT CTGTTCATCG GCGCAATCAT CATTTCCGGG
GTCATCATGG CCTTCGGTGA ACGCGGTGAA ATCGCTGCCC AGCGCATCGC CATGCGGGTT
TCAGGCGCAG AGCGCGGTAA ACCCCTGGCC ACGCTGTGTA CGGCTACCAT TCGCGCGGTG
GCACAAGGGG TGATTGGCAT TGCCTTCATC CAGATGCTGC TGATCGGTGT TGGTTTTATC
GTCAAAGGGG TTCCCGGTGC CGGGATGCTG GCCATCGTCA TCCTCATGCT GGGCATTGCA
CAGGCCCCGG CGACGCTGGT GACCTTGCCG GTGATCATTT ATGTGTTCAA CGCCGAAGGC
TTCACGGTGG CGACCATCAT TTTTGCCGTC TACACCTTTG TCGCCGGCCT TGCCGACAAC
GTGCTCAAGC CGCTGCTGCT GGGGCGCGGG GTCGATGTAC CAATGCCGGT GGTACTGATC
GGCGCATTGG GCGGGATGGT GGTCAAAGGC ATCATCGGCT TGTTCATCGG CCCGGTAATC
CTTGGCGTGG CCTACGTGTT GTTCTGGCAA TGGGTTGCGC TGCAGGTGCC GGAGCAACCG
GCACCACCTG CCGCCTGA
|
|---|
| Protein sequence | MQSSFKLDSA LSRGLLDVLI KAGLVAALVI FAFQVFQPFL ELMMWAVILA VTLYPLHCRI
QRRTGLKQGY VATLVVLLVL VLLLVPIYLV MMSIGESVDS LVTLLKSGAW SVPVPPDSVA
TWPLIGPKVH ALWLAASENM ASVLNQWMPQ IKGAGLTVLG AAASAGGAFL LFIGAIIISG
VIMAFGERGE IAAQRIAMRV SGAERGKPLA TLCTATIRAV AQGVIGIAFI QMLLIGVGFI
VKGVPGAGML AIVILMLGIA QAPATLVTLP VIIYVFNAEG FTVATIIFAV YTFVAGLADN
VLKPLLLGRG VDVPMPVVLI GALGGMVVKG IIGLFIGPVI LGVAYVLFWQ WVALQVPEQP
APPAA
|
|---|
| |