Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0743 |
Symbol | |
ID | 5190316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 833571 |
End bp | 835070 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585202 |
Product | permease for cytosine/purine, uracil, thiamine, allantoin |
Protein accession | YP_001266091 |
Protein GI | 148545989 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1457] Purine-cytosine permease and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.263907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACT CGACCGGTAT CGAGACCAAC GGCGTCGAAC AGATCCCCGC CGATCAACGC GACGCCTCCC CGCTGGACCT GTTCCGCCTG ATCTTCGGCG GTGCCAATAC CTTCGCTACC GCCGTACTGG GCAGCTTCCC GGTGCTTTTC GGGTTGTCAT TCCAGGCGGG TGTGTGGGCG ATTCTGCTCG GCGTTGGCAT CGGCGCGCTG ATCCTTGCAC CGATGGGGCT GTTCGGTGCG CTTAACGGCA CCAACAACGC CGTTTCATCA GGCGCGCACT TTGGCGTACA CGGGCGCATC GTCGGCTCGT TCCTGTCGCT GCTCACGGCG GTGGCGTTTT TCTCACTCTC GGTATGGAGC TCGGGCGATG CATTGGTCGG TGGTGCCAAG CGCCTGGCCG GCCTGCCAGA GACCGACCTG ACCCTGGGGC TGGCCTACGG TGTGTTCGCG GTGCTGGTCC TGGTGGTCTG CATCTTTGGC TTCCGCTTCA TGCTGTGGGT CAACAAGATT GCCGTGTGGG CCTCGAGCCT GCTGTTCCTG CTGGGCATCG TCGCCTTTGC CGGGCCCTTC GATGCCGGCT ACGCAGGCAG CGTCAACCTT GGCCAGGCAG GCTTCTGGGC TGCGTTCGTC GGCGCGGCGA TCCTGGCCAT GAGCAACCCG GTGTCGTTTG GCGCCTTCCT GGGTGACTGG TCGCGCTACA TTCCACGCGA AACCCCCAAG GCACGCATCA TGCTGGCAGT GATCGCGGCA CAGGGAGCGA CGCTGATTCC GTTCCTGTTC GGCCTGTGTA CGGCCACCCT GGTCGCCACC CAGGCGCCGG ACTACATTGC CGCCAACAAC TATGTCGGCG GCCTGCTGGC GGTAGCGCCA AGCTGGTTCT TCCTGCCGGT GTGCCTGATT GCGGTGATCG GCGGCATGTC CACCGGCACC ACCGCGCTGT ATGGCACCGG CCTGGACATG TCCAGCGTGT TCCCACGCTT GCTAAGCCGA GCCGGCGCCA CCCTGCTGAT CGGCGTGCTG GCGATCGGCT TCATCTTCAT TGGCCGCTTC ACCTTCAACC TCGTGCAGAG CGTATCGACC TTTGCCGTGC TGATCATTAC CTGCACCAGC CCGTGGATGG TGATCATGAT CCTTGGCCTG ATTACCCGCC GCGGCTTCTA CCACGCCGAC GACCTGCAGG TATTCACCCG CGGCCAGCGT GGTGGCCACT ACTGGTTCCT GCACGGCTGG AACTGGCGCG GCATGGGGGC GTGGATCCCC AGTGCGGCGG TCGGCCTGTG CTTCGTCAAC CTGCCGGGGC AGTTCGTCGG CCCACTGGGT GACCTGGCGG GCGGCATCGA CCTGAGCCTG CCGGTCACGC TGGGGCTGGC TGGCGTGCTG TACCTGCTGT TGCTCAACCT GTTCCCTGAA CCTGCTGGCG TGTATGGCCC CTTGGGCCCG CGATGGGTGC GTTGCAAAAG CACCGCGCAT ACGCCTGTGA CCACTGCCAA AATGGCCTGA
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Protein sequence | MSHSTGIETN GVEQIPADQR DASPLDLFRL IFGGANTFAT AVLGSFPVLF GLSFQAGVWA ILLGVGIGAL ILAPMGLFGA LNGTNNAVSS GAHFGVHGRI VGSFLSLLTA VAFFSLSVWS SGDALVGGAK RLAGLPETDL TLGLAYGVFA VLVLVVCIFG FRFMLWVNKI AVWASSLLFL LGIVAFAGPF DAGYAGSVNL GQAGFWAAFV GAAILAMSNP VSFGAFLGDW SRYIPRETPK ARIMLAVIAA QGATLIPFLF GLCTATLVAT QAPDYIAANN YVGGLLAVAP SWFFLPVCLI AVIGGMSTGT TALYGTGLDM SSVFPRLLSR AGATLLIGVL AIGFIFIGRF TFNLVQSVST FAVLIITCTS PWMVIMILGL ITRRGFYHAD DLQVFTRGQR GGHYWFLHGW NWRGMGAWIP SAAVGLCFVN LPGQFVGPLG DLAGGIDLSL PVTLGLAGVL YLLLLNLFPE PAGVYGPLGP RWVRCKSTAH TPVTTAKMA
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