| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0740 |
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| Symbol | |
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| ID | 5192806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 827892 |
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| End bp | 830303 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585199 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001266088 |
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| Protein GI | 148545986 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.333087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGTG TCAGCCTTGC CCGTTATTGC CCAGGTCTGA TTGCCCTGCT GGCCCTGATG
CTGTTGCTTG TCAGCCCGGC CTGGTCGGCC CCGGCCACGC CATTGTCCAA CTTGGCGGCT
GCCGAAGCGC CCGCACTGGA CGAAAACGCC AGCCTCGAAC AGCTGAGTGA CCGCTTGGAC
CTGATCCGCC AAGGCGTCAC CAGCGAGGCC AACGACGACG TGCTGTCGCA ACTGCGCCTG
GGCGCGATGC AGGTTCAGCG TCAAGCTGAT GCACTGAGTA CACAGCGCAC TGCCGATGTG
GGAAAACTCG ACGACCAGCT GAAGGTCATC GGCCCGGCCC AGCCGGACGA GGCCGCTACC
CTGACGCAGC AGCGCAAAGC GCTGGAGGCC GAGAAAAAGG CGCTGGTAGC CCAGCAGGAT
CAGGCCACCA AGCTGACCCA GTCGGCCCGT GACCTGTCCA CGCAAATCGT CAACCTGCGC
CGCAGCCAGT TCAACTCGCA AATCACCAGC CGTGCAGCCT CGCCGCTGAG CCCCGCGTTC
TGGCAGAGCA TCATCCGCCC CACCCAGGAC GACGTGGCGC GCCTGCGTGA CCTGCGCGGC
GAGGCGGCCG ATGCCATCAG CAGCGCCTTC AGCGCCGAAA ACCGCTGGCT GTTCGTTGCC
AGCCTGGTGG CGGCGATTCT GGTGTGGACG TTGGTGCGGC GCGTGCTTGA ACGCTTGCTG
GCCAGTGCCA TGGTTCACTG GCTGCCGGAG GGCCGCCTGC GCCGCAGCGC CTTGGCTCTG
GGCGTTAGCC TGGCAACCCT GGGCACCATC GCCGGCTCGG TGTCGTTGCT GCGCTGGGGG
CTGGAAAGCA ATGCACGCTT AGGTTCGGAT ATTGCCAGCC TGACCAATCA CATTCTCACC
CTGGTGGTGT TCAGTGCCTT CATCACAGGC CTGGGCCGCG CCATGCTGAT GCTGCAGCGT
CCGTCCTGGC GGTTGCCGGC GATCCACGAC GAAGTCGCCA GTGCGCTGGG CTGGTTCCCG
AAGGTGCTGG CATTGGCACT GATGGTCATG ATGACCATGG AGCGCATGAA CAGCGTGATC
GGCGCCAGCC TGGCCCTGAC GGTGGCCGTC AACGGGCTGA CCGCGCTGGT GGTGGCGCTC
ACCTTTGCTG GCGCGCTGCT GTGTTACCGC CGCACCCTGC GCAAGCATGG CCTGGAGCGC
CCGACGGGCC TGGCCGGGCT GATCCCGTTC GTGATGGTCA TCTGGCTGAC GTTGATCCTG
CTGGCGCTGC TCACCGGCTA CCTGACACTC GCCTATTTCC TCACCGCCAA GCTGTTGTGG
GTCAGCCTGG TGATCACCTG TGCCTACTTG CTGACCACCT TCTTCGGCGA CCTGTGCGAA
ACCCTGCTGT CACCCCGCCA GCCCGGTGGC CTGGCTCTGG CGTCGACCCT GGGCCTGGCG
CCTCGCCACC AGGCCCAGGC CAGTACCATA CTGGCCGGCA TCGGCCGCAC GGTCGTGCTG
TTCCTGGCAC TGTTGCTGGT GTTGATGCCG TCGGGCACCA GCCCTAGCGA ATTGCTGTTG
AGTCTGGGCG ACTGGGATGG GACCGGCGGC AAGCTGCTCG GTAACCTGAA CATCGTGCCG
CAGGACATCC TGCTGGCCTT GGCCATCTTC CTCGGCGGCC TGTTCGCCAT CCGTGTGGTC
AAGCGCTGGC TGAGCGACCG CCTGCTGCCG GAAACCGAGA TGGACGCCGG TATGCGGGCC
TCGCTGGTAA CCCTGGTGGG TTACCTGGGT TTCCTGTTCC TGGCCATGCT GGTGATGTCG
ACCTTGCGTA TCAACCTCAC CAGCCTGACC TGGGTGGTCA GTGCCCTGTC GGTCGGTATC
GGTTTCGGTT TGCAGCAGAT CGTGCAGAAC TTCATTTCCG GCCTGATTCT GCTGACCGAG
CGCCCGGTGA AGGTCGGCGA CTGGGTCAGC CTGGCGGGTG TCGAGGGTGA TATCCGCCGC
ATCAATGTCC GCGCCACCGA GATCCAGATG TCTGACCGTT CCACGGTGAT CGTGCCCAAC
TCGCAGTTCA TCTCGCAGAA CGTGCGCAAC GTGACCATGG GCAACGCGCT GGGCGTGGTC
AGCATTACCC TGACACTGCC GCTGGAGACC GATGCCAACC GTGTGCGTGA GCTGCTGCTG
GCGGCTTACC ATGAGCATGA GGCGATTCTG GATGCGCCAG CTACCTCGGT GTCGTTCAAG
GACCTGACGG CCAGCGGTAT GGTGATCGGT GTGAGTGGCT ATGTGGCTGG GCCGCGGCAG
GTATCGGGCA CCCGCAGCGA CCTGCTGTTC ACCATTCTTG GCCGGTTGCG TGATGAAGGC
ATTCCACTGT CTTCGCCGCA GAGCATGGTG CTGGTGCAGG AAGGTACGCG GCCGGCTGAC
GAGTCGGTGT AG
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| Protein sequence | MRRVSLARYC PGLIALLALM LLLVSPAWSA PATPLSNLAA AEAPALDENA SLEQLSDRLD
LIRQGVTSEA NDDVLSQLRL GAMQVQRQAD ALSTQRTADV GKLDDQLKVI GPAQPDEAAT
LTQQRKALEA EKKALVAQQD QATKLTQSAR DLSTQIVNLR RSQFNSQITS RAASPLSPAF
WQSIIRPTQD DVARLRDLRG EAADAISSAF SAENRWLFVA SLVAAILVWT LVRRVLERLL
ASAMVHWLPE GRLRRSALAL GVSLATLGTI AGSVSLLRWG LESNARLGSD IASLTNHILT
LVVFSAFITG LGRAMLMLQR PSWRLPAIHD EVASALGWFP KVLALALMVM MTMERMNSVI
GASLALTVAV NGLTALVVAL TFAGALLCYR RTLRKHGLER PTGLAGLIPF VMVIWLTLIL
LALLTGYLTL AYFLTAKLLW VSLVITCAYL LTTFFGDLCE TLLSPRQPGG LALASTLGLA
PRHQAQASTI LAGIGRTVVL FLALLLVLMP SGTSPSELLL SLGDWDGTGG KLLGNLNIVP
QDILLALAIF LGGLFAIRVV KRWLSDRLLP ETEMDAGMRA SLVTLVGYLG FLFLAMLVMS
TLRINLTSLT WVVSALSVGI GFGLQQIVQN FISGLILLTE RPVKVGDWVS LAGVEGDIRR
INVRATEIQM SDRSTVIVPN SQFISQNVRN VTMGNALGVV SITLTLPLET DANRVRELLL
AAYHEHEAIL DAPATSVSFK DLTASGMVIG VSGYVAGPRQ VSGTRSDLLF TILGRLRDEG
IPLSSPQSMV LVQEGTRPAD ESV
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