Gene Pput_0715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0715 
Symbol 
ID5194950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp804826 
End bp805443 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID640585173 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_001266063 
Protein GI148545961 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0142826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC TCAACCTGTC TACCGACGAA ACGCGCGTCA GCTACGGTAT CGGCCGTCAG 
CTGGGCGGCC AGCTGCGCGA CAACCCGCCA CCAGGCGTTA GCCTGGAAGC CATCCTGGCC
GGCCTGACCG ACGCCTTCAA CGGTGCCGAC AGCCGCGTCA GCGAAGCCGA CCTGTCGGCC
AGCTTCAAGG TCATCCGTGA GGTGATGCAA GCCGAAGCTG CAGCCAAGGC CGAAGCCGCC
GCTGCTGCTG GCAAGGAGTT CCTGGTCGAG AACGCCAAGC GTGAAGGCAT CACCACGCTG
GCTTCGGGCC TGCAGTTCGA AGTGCTGACC GCTGGCGAAG GCGCCAAGCC GACCCGCGAA
GACAACGTGC GTACGCACTA CCACGGCACC CTGATCGACG GCACCGTGTT CGACAGCTCC
TACGAGCGTG GCCAGCCGGC TGAATTCCCG GTCGGCGGCG TGATCGCTGG CTGGACCGAA
GCCCTGCAGC TGATGAACGC TGGCAGCAAA TGGCGCCTGT ACGTGCCAAG CGAGCTGGCT
TACGGCGCCC AAGGCGTTGG CAGCATCCCG CCGCACAGCG TACTGGTGTT CGACGTCGAG
CTGCTCGACG TTCTGTAA
 
Protein sequence
MSELNLSTDE TRVSYGIGRQ LGGQLRDNPP PGVSLEAILA GLTDAFNGAD SRVSEADLSA 
SFKVIREVMQ AEAAAKAEAA AAAGKEFLVE NAKREGITTL ASGLQFEVLT AGEGAKPTRE
DNVRTHYHGT LIDGTVFDSS YERGQPAEFP VGGVIAGWTE ALQLMNAGSK WRLYVPSELA
YGAQGVGSIP PHSVLVFDVE LLDVL