| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0701 |
|---|
| Symbol | |
|---|
| ID | 5193073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 785789 |
|---|
| End bp | 786742 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640585159 |
|---|
| Product | bile acid:sodium symporter |
|---|
| Protein accession | YP_001266049 |
|---|
| Protein GI | 148545947 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.479661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0319334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCAGAG AACAACTCGA GACCCACCAG ATCCCGATCT ACTTCGCTGC CGTGCTCGCA
GCCGTTGCCT TCGGCTTGAT GGCCAGCCAC AGCGCACGGC ATCTGGAAGC CCTGATCAAT
CCCGCCATCG CCGTGTTGAT GTACGCGATG TTCCTGCAAA TACCCTTCCT CGACCTGCGC
CAGGGCCTGG GTAACCGCCG CTTCATCACG GCCCTGCTAC TGGCCAATTT CATGCTCGTT
CCGCTGCTTG TCTGGGCCAT CACCCGCGGG CTGGTGGAAC ACCCGGCGAT CCTCGTCGGT
GCCTTGCTGG TGCTGCTTAC GCCCTGCATC GACTACGTGG TGGTGTTCAC CCACATTGGC
AAAGGCGACT CACGCCTGAC ACTGGCCGCA ACCCCCCTGT TATTGCTGGC GCAACTGGTG
CTGCTGCCGG TGTACCTGGC CCTGATGCTG GGTGGCAGCA GCCAGGTGGC AATTTCCATC
ACCCCGTTCG TGGAAGCCTT CGCGCTGTTG ATCGTGTTGC CGATGGCCCT CGCGGTGCTC
ACCAGCGCCG GTGCCCGGCG CTCGCGCGCA GTCGCGACCT GGAACGACGC CTGGGCGTGG
TTGCCGGTGC CGGCGATGGC CTTGGTGCTG ATGGTGGTGA TCGCTTCGCA GATTGCCGTG
GTACTGCGTG ATTTCGACCG TTTGCTGCCG GTGGTTCCGG TATACATCGG CTTCATGCTG
CTGGCGCCGG TGCTCGGCTT CATCTGTGCG CGCCTGCTGC GCCTGCCGGC CAGCGAGGCA
CGCTCGGTGA CCTTCAGCGC AGCCACGCGC AACTCGCTGG TGGTGCTGCC GCTGGCGCTG
GCGTTGCCAG AAGAGATGCG CGGGTTGGCG GCGGCAGCCG TGATCACGCA AACCCTGGTA
GAGCTGGTGA GCGAACTGAT CTATGTACGG GCGGTACCAC GGTTTGTGCG TTGA
|
|---|
| Protein sequence | MTREQLETHQ IPIYFAAVLA AVAFGLMASH SARHLEALIN PAIAVLMYAM FLQIPFLDLR
QGLGNRRFIT ALLLANFMLV PLLVWAITRG LVEHPAILVG ALLVLLTPCI DYVVVFTHIG
KGDSRLTLAA TPLLLLAQLV LLPVYLALML GGSSQVAISI TPFVEAFALL IVLPMALAVL
TSAGARRSRA VATWNDAWAW LPVPAMALVL MVVIASQIAV VLRDFDRLLP VVPVYIGFML
LAPVLGFICA RLLRLPASEA RSVTFSAATR NSLVVLPLAL ALPEEMRGLA AAAVITQTLV
ELVSELIYVR AVPRFVR
|
|---|
| |