| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0698 |
|---|
| Symbol | |
|---|
| ID | 5193932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 782922 |
|---|
| End bp | 783965 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640585156 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_001266046 |
|---|
| Protein GI | 148545944 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.645854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0139145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAT ACAAAATTGC ACTCGTTGGC TTTGGTGGCG TTAACCGCGC GCTTGCCCAA
CTGATCGCCG AACGCAATGC GCGCTGGCAG CACGAGTTGG GCTTTGGCCT GAAAATCGTT
GGTGTCACCG ACTTGTTCCT GGGGTCGGTG ATCGACCGCG ACGGCCTGGA TGCCGCCATG
CTGGCCGCGC TGCCGGCCCA GAAGGGTGCG CTGGCGCAAA TCCCTCAAGG TTCGGCCGAG
GCGTTCAATG AGGCGGTGAT CAAGCAATCA GGCGCCGACA TCATCGCCGA GGCCACATTC
ACCAACCCCA AGGACGGTGA GCCGGCAGCA ACCTTCTGCC GCTGGGCGCT GGAGGCGGGC
AAGCACGTGG TCACCACCAA CAAGGGGCCG ATTGCCTTGC ATGCCCAGGC GCTCAAGGCC
TTGGCCAAGG CCAACAATGT GTCGTTCGAA TACGAAGGCG CCGTCATGAG CGGCACACCG
GTGCTGCGCA TGGCGCGCCA GACCCTGGCG GGCGCGGGCC TGGTAGGTTT CGAGGGCATT
CTCAACGGTA CCTCTAACTA TGTGCTCACG CGCATGGAGG AAGGGCTTGG CTTCGACGAG
GCGGTGGCCC AGGCACAAGC GCTTGGCTTT GCCGAGGCTG ACCCGACCGC CGATGTGGAA
GGCCATGACG TACGCCTGAA GGTGGTGATC CTCGCCAATG AGTTGCTCGG CGCCTGTCTG
CAGGTGGGTG ATGTGGCCTG CAGCGGTATC AGTGCCATCG ACAGCGCAGC TATCGAGCGG
GCACAGGCGG CGGGCGAGCG CTGGAAGCTG ATCGGCAGCG CCCGCCGTGA AGCTGACGGC
TCGGTGCGAG CCAGCGTCGA AGCGAAGCTG TTGCCTGGCC ATCACCCCTT GGCGGGTATT
TCAGGCGCCA CCAATGCGCT GGCGTTCGAC ACCGAGTTGC TGGGGGCTGT AACCGTGTCC
GGCCCGGGTG CGGGGCGCAT TGAAACGGCT TTTGCCCTGC TGTCGGACAT TGTCGCCATT
CACACCGCCG GCCATTCGGC CTGA
|
|---|
| Protein sequence | MTEYKIALVG FGGVNRALAQ LIAERNARWQ HELGFGLKIV GVTDLFLGSV IDRDGLDAAM
LAALPAQKGA LAQIPQGSAE AFNEAVIKQS GADIIAEATF TNPKDGEPAA TFCRWALEAG
KHVVTTNKGP IALHAQALKA LAKANNVSFE YEGAVMSGTP VLRMARQTLA GAGLVGFEGI
LNGTSNYVLT RMEEGLGFDE AVAQAQALGF AEADPTADVE GHDVRLKVVI LANELLGACL
QVGDVACSGI SAIDSAAIER AQAAGERWKL IGSARREADG SVRASVEAKL LPGHHPLAGI
SGATNALAFD TELLGAVTVS GPGAGRIETA FALLSDIVAI HTAGHSA
|
|---|
| |