Gene Pput_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0659 
Symbol 
ID5190201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp743880 
End bp745082 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content64% 
IMG OID640585114 
Productbranched chain amino acid ABC transporter amino acid-binding protein 
Protein accessionYP_001266011 
Protein GI148545909 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0430109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAC GTACCCTGCT CAAGGCAGGC CTTGCCCTAG GTGCCTTAGG TAGCCTCCCC 
TTGGGGGCAC ACCGGGCATT CGCCGACCAA CCGCTGACCT TCTATGGGCT CAAGTCCATG
TCGGGGGCCT TCGCCAGCTA CGGCAAGTAC GCCGACATGG GCTCGCGCCT GGCCATCGCC
GAGCACCCAC AGTTGCTCGG CCACCCGCTC AAGTACAAAG TCATCGACAC CGAAGGCAAC
GCCGGCAAGG CGGTGCGCAA GGTGCAGGAA GCCATCGGCC AGGATGGCGC ACGCTTCTTC
CAGGGGTGCA CCCTGTCGTC TTCGGCACTG GCGGTGTCCA AGGAAATCCA CAAAGCCGGC
GGCGTGTTCA TGACGCCTGT GGGCGCCGAT GAAATCACCG GCAAGGACTG CAATGCCTCA
ACCTTCCGCT GGTCGGTGCC CACCTATGGT GCCATCCGCG AAACCCTGGT GCCGATGAGC
CGCCAGCTGC CCCAGGCCAA GCGCTGGTAC ACCATCACCC CGCAATACGT ATTCGGCGAT
GCCCTGCTGG ACAACGCCCG CAAAGTGTTC GCCGAGCTCG GCGTGGAACA CATCGGCAAC
AGCTACCACT CGCTGCAGGA GCAGGAATTT TCCGGCTACC TGACCAACGC CATCGCCGCC
AAGCCCGACG TACTGGTGCT GCTCAACTTC GGTAGCCAGG CCTCCAACGC CCTGCGCCAG
GCGGTCAACT TCGGCATCAA GGACCGCATG AAAGTGCTGA TGGTGTGGTC TGCCGGCCTC
GACCAGTTCC AGGAGCTGGG CAGCGACGTG CTCGAGGGCG TGTACCTGGG TGCGCAGTAC
TGGCACCAGG TCGACACCCC GCTGAACAAA CAGTTGGTCG CCGCCACCCG CAAGGCCTAT
GGCATCAACC CCAACTACCC GCTGGCCGCC GACTACATCG GCACCAAGGT GATGCTCGAG
GCCATCGTCA AGGCCGGCAG CCTGGACGGG GCCGCCGTGT CTGCGGCATT GCAGGGCATG
CGCTTCCAGG GCCCGACCGG CGAAGAACTG ATCCGCCCGG GTGACCACCA GGTGCTCAAG
GATTACTACC TGCTGCGCGG CAAGCCCCAG GGGCAGATGC GCGACGAGGA CGACCTGGCC
GAAGTCATCA GTTCGGGCCG CTCGTTCGTC GAGGTCGATC ACACCGGTTG CGCCCTGGCC
TGA
 
Protein sequence
MQRRTLLKAG LALGALGSLP LGAHRAFADQ PLTFYGLKSM SGAFASYGKY ADMGSRLAIA 
EHPQLLGHPL KYKVIDTEGN AGKAVRKVQE AIGQDGARFF QGCTLSSSAL AVSKEIHKAG
GVFMTPVGAD EITGKDCNAS TFRWSVPTYG AIRETLVPMS RQLPQAKRWY TITPQYVFGD
ALLDNARKVF AELGVEHIGN SYHSLQEQEF SGYLTNAIAA KPDVLVLLNF GSQASNALRQ
AVNFGIKDRM KVLMVWSAGL DQFQELGSDV LEGVYLGAQY WHQVDTPLNK QLVAATRKAY
GINPNYPLAA DYIGTKVMLE AIVKAGSLDG AAVSAALQGM RFQGPTGEEL IRPGDHQVLK
DYYLLRGKPQ GQMRDEDDLA EVISSGRSFV EVDHTGCALA