Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0653 |
Symbol | |
ID | 5193138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 737684 |
End bp | 739093 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585108 |
Product | putative amidase |
Protein accession | YP_001266005 |
Protein GI | 148545903 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.247147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA AAACCGCGAT TGGCGAACTC ACCGCCGTCG AACTGCTCGA ACTGTACCAG CGCCGCCAGT TGTCACCCGT CGAGGTGGTC GACGATGTGC TGGCGCGCAT CGACCTGCAT AACCCGGCGG TCAACGCCTA CTGCCATGTC GACGGCGAAG GTGCCCGCGC CGCCGCCCGT GCCAGCGAAC AGCGCTGGCA ACGTGGCCAA CCCTGTGGCC GACTGGATGG CGTACCCGCC TCGATCAAGG ACCTGACCCT GACCCGCGGC ATGCCTACCC GCAAGGGCTC GCGTACTACC TCGGGTTCCG GGCCGTGGGA AATCGATGCG CCCTTCAGCG CCTTCATGCG TGAAGCCGGT GCTGTGCTGG TAGGCAAGAC CACCACGCCG GAGTTCGGCT GGAAAGGCGT GACCGACAAC CCGCTGTACG GCATTACCCG CAACCCTTGG GATACCAGGC TGACTGCCGG TGGTTCGTCT GGTGGTGCTG CGGCAGCCGC CGCGCTGAAC CTGGGGGTGC TGCATCAGGG CAGCGATGCC GGTGGTTCGA TTCGCATCCC TTGCGCCTTC ACCGGCACCT TCGGCATCAA ACCGACCTTC GGCTATGTGC CGCAATGGCC GGCCAGCGCC ATGACCGTGC TGTCGCACCT GGGGCCGATG ACGCGTACCG TGGACGACTC GGTGCTGATG CTTGACTGCG TAGCGCGCCC CGATGCCCGC GACGGTTTGG CCGGCGCACC CCGGCAGGCG CCTTGGCTCA GCCAGCAGCA AGATCTGAGT GGGCTACGCA TCGCCTACAG CGCCAACTTC GGTTACGTGC AGGTCGCCCC ACAGATCCAG GCACTGGTGG CGCAAGCGGT GCAGCGCCTG GCGCGGCTGG GTGCGCAGGT AGAGGAAGTG GACCCGGGCT TCAGCGACCC GCTGGAAACC TTCAATACCC TGTGGTTTGC CGGTGCGGCG CGGTTGGCCA GTGCCTTGAG CGATGAGCAG AAAGCGTTGC TTGACCCGGG GCTGCGCTGG ATTGCCGAAC AAGGCGCACA GATCAGCCTT GGCGAATACA CCCAGGCGCT AGAGGCACGG GCAGAATTGA TTGCGAAGAT GAATGCCTTT CATCAGCGAT ATGACGTGCT GGTATCGCCG ATGCTGCCGT TGGTGGCGTT CGAAGCCGGA CACAACGTGC CGCCTGGGTC GGGGATGGCG CAATGGATGG AATGGACGCC GTTCAGCTAT CCGTTCAACC TGACCCAACA GCCGGCAGCC TCGGTGCCCT GCGGGTTTAC CCGCGAGGGG TTGCCGGTGG GTCTGCAGGT GGTGGCCGGG CGCTTTGCCG ATGAGCAAGT GCTGCGGGTG TGCAAGGTGT ATGAGCAGCA TTATCCGAGC CGGCACTTGC AAGCACCGAT TACTGGCTGA
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Protein sequence | MTQKTAIGEL TAVELLELYQ RRQLSPVEVV DDVLARIDLH NPAVNAYCHV DGEGARAAAR ASEQRWQRGQ PCGRLDGVPA SIKDLTLTRG MPTRKGSRTT SGSGPWEIDA PFSAFMREAG AVLVGKTTTP EFGWKGVTDN PLYGITRNPW DTRLTAGGSS GGAAAAAALN LGVLHQGSDA GGSIRIPCAF TGTFGIKPTF GYVPQWPASA MTVLSHLGPM TRTVDDSVLM LDCVARPDAR DGLAGAPRQA PWLSQQQDLS GLRIAYSANF GYVQVAPQIQ ALVAQAVQRL ARLGAQVEEV DPGFSDPLET FNTLWFAGAA RLASALSDEQ KALLDPGLRW IAEQGAQISL GEYTQALEAR AELIAKMNAF HQRYDVLVSP MLPLVAFEAG HNVPPGSGMA QWMEWTPFSY PFNLTQQPAA SVPCGFTREG LPVGLQVVAG RFADEQVLRV CKVYEQHYPS RHLQAPITG
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