| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0652 |
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| Symbol | |
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| ID | 5191794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 736442 |
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| End bp | 737539 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585107 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001266004 |
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| Protein GI | 148545902 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.139028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.321624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC AAGTAGTGGT GGTCGGCGGC GGGGTGATCG GCCTGCTGAC GGCATTCAAC
CTGGCAGCCA AGGTCGGCCA GGTGGTGGTG TGCGATCAGG GTGAGGTTGG CCGAGAGTCG
TCCTGGGCTG GCGGAGGCAT TGTCTCGCCG TTGTACCCGT GGCGCTACAG CGCCGCAGTG
ACCGCTCTGG CGCACTGGTC GCAGGACTTT TATCCACAGC TGGGCGAGCG TCTGTTCGCC
AGCACCGGTG TCGACCCCGA AGTTCACACC ACCGGGCTGT ACTGGCTCGA CCTGGACGAC
GAGGCCGAAG CGTTGGCCTG GGCCGCGCGC GAGCAGCGGC CGCTGAGTGC CGTGGATATT
TCGGCGGCCT ACGATGCGGT GCCGGTGCTG GGCCCGGGTT TCAAGCACGC CATCTACATG
GCTGGCGTGG CCAATGTGCG CAACCCACGC TTGGTCAAGT CGCTGAAAGC GGCGTTGCTG
GCGCTGCCAA ACGTGACCTT GCGCGAACAC TGCCAGATCA CCGGCTTCGT GCAGGAAAAG
GGGCGCGTGA CCGGTGTACA GACGGCTGAT GGCGTACTGG CGGCCGATGA GGTTGTGCTC
AGTGCAGGCG CCTGGAGTGG CGACCTGTTG CGTACCCTTG GCCTTGAACT GCCGGTGGAG
CCCGTGAAGG GCCAGATGAT CCTGTTCAAG TGCGCTGAAT ACTTCTTGCC GAGCATGGTG
CTGGCCAAGG GACGTTATGC AATCCCGCGA CGTGACGGGC ACATTCTGGT GGGGAGCACG
CTGGAACACG CCGGGTATGA CAAGACCCCG ACCGGGGATG CGCTGGAAAG CCTGAAGGCA
TCGGCGGTGG AGTTGTTGCC TGAGCTTGAA GGCGCCACAG TGGTGGCGCA CTGGGCGGGA
CTGCGGCCGG GGTCGCCAGA AGGCATCCCT TACATTGGGC CTGTGCCAGG GCATGAAGGG
TTGTGGCTAA ACTGTGGGCA TTATCGCAAT GGGCTGGTGT TGGCGCCGGC TTCGTGCCAG
CTGTTTACCG ATTTGCTGAC CGGGGCCGAG CCGATTATCG ACCCGGCGCC GTATGCGCCA
GAAGGGCGTT TGGGCTGA
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| Protein sequence | MSKQVVVVGG GVIGLLTAFN LAAKVGQVVV CDQGEVGRES SWAGGGIVSP LYPWRYSAAV
TALAHWSQDF YPQLGERLFA STGVDPEVHT TGLYWLDLDD EAEALAWAAR EQRPLSAVDI
SAAYDAVPVL GPGFKHAIYM AGVANVRNPR LVKSLKAALL ALPNVTLREH CQITGFVQEK
GRVTGVQTAD GVLAADEVVL SAGAWSGDLL RTLGLELPVE PVKGQMILFK CAEYFLPSMV
LAKGRYAIPR RDGHILVGST LEHAGYDKTP TGDALESLKA SAVELLPELE GATVVAHWAG
LRPGSPEGIP YIGPVPGHEG LWLNCGHYRN GLVLAPASCQ LFTDLLTGAE PIIDPAPYAP
EGRLG
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