| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0648 |
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| Symbol | |
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| ID | 5191178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 734126 |
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| End bp | 734608 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585103 |
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| Product | hypothetical protein |
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| Protein accession | YP_001266000 |
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| Protein GI | 148545898 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.271729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCAAC GCGGCGTAAC ACTGATACAA ATGTTGTCGG CCTTGGCCGT GGCGGTCTTG
CTGACCCAAC TGGGCATGCC GGCCTACGCC CGAATGAGCG ATGACCTGCA CCGGGCGGCG
GCTGCCCGTG ATCTGGCGCA GGCGCTGCGC AGTGCACGCA GCCATGCCAT GCTGCAAAGC
CAGCCGGTGC TGGTGCTGGC GCTGGACGGT AATTGGGGGA ATGGTTGGCG GGTAGTGCTG
GAGCATAACC GGCAGGTGCT ACGCGAACAG CGCCTTTCAA AGCCGCTGAA AATAACCAGC
AATCGCGGCG AGCAGTTCAA ATTCAGTGCG CTGGGCGTGC CAATGACGTC GGGCAACAGC
TGGTTGGGCG CAACACTGGA AATGTGCGAA CGCGCCGCTG CTCGCAGCCG ATATCAAGTG
GCGCTGGCAT CAAGCGGCAG AGTCAGGTTG CTTACGGAGG ACCGGAGCAA TGACCGCTGC
TAG
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| Protein sequence | MKQRGVTLIQ MLSALAVAVL LTQLGMPAYA RMSDDLHRAA AARDLAQALR SARSHAMLQS
QPVLVLALDG NWGNGWRVVL EHNRQVLREQ RLSKPLKITS NRGEQFKFSA LGVPMTSGNS
WLGATLEMCE RAAARSRYQV ALASSGRVRL LTEDRSNDRC
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