| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0647 |
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| Symbol | ispH |
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| ID | 5191177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 733102 |
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| End bp | 734049 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585102 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001265999 |
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| Protein GI | 148545897 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.30561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCA AACTCGCCAA CCCGCGCGGC TTCTGCGCCG GGGTCGACCG GGCGATCGAG
ATCGTCAACC GCGCGCTGGA AGTCTTCGGC CCGCCGATCT ATGTGCGCCA CGAAGTGGTG
CACAACAAGT TCGTGGTGGA AGACTTGCGT AACCGCGGCG CCATCTTTGT CGAAGAGCTG
GACCAGGTGC CGGACGATGT CATCGTCATC TTCAGTGCCC ACGGTGTTTC CCAGGCTGTG
CGCCAGGAAG CTGCTGGCCG TGGCCTGAAA GTGTTCGATG CTACCTGCCC GCTGGTGACC
AAGGTTCACA TCGAAGTGGC CAAGTACAGC CGCGATGGCC GTGAGTGCAT TCTCATCGGC
CACGAAGGGC ACCCGGAAGT CGAAGGCACC ATGGGCCAGT ACGATGCCAG CAACGGCGGC
GCCATCTACC TTGTCGAAGA CGAGGAAGAT GTTGCCAACC TGCAGGTGCG CGACCCGAAC
CACCTGGCTT TCGTCACCCA GACAACACTG TCGATGGACG ACACCAGCCG CGTCATCGAT
GCGCTGCGTG CGCGCTTCCC GAACATCGGT GGCCCGCGCA AGGACGACAT CTGCTACGCC
ACCCAGAACC GCCAGGACGC CGTCAAGCAA CTGGCCGGCG AGAGCGACGT GGTGCTGGTG
GTGGGCAGCC CGAACAGTTC CAACTCCAAC CGTTTGCGCG AGCTGGCTGA GCGCATGGGC
ACCCCGGCCT ACCTGATCGA CGGTGCCGAG GACATGCAAC GCGGCTGGTT TGACCAGACC
GCGCGGATCG GCATCACCGC CGGTGCTTCG GCACCCGAAG TGCTGGTGCG TGGCGTGATC
GAACAGCTCA AGGCCTGGGG CGCTACCGGC GCAGAAGAGC TGGACGGGCG CGAAGAGAAC
ATCACCTTTT CAATGCCCAA AGAGCTGCGG GTTCGCTCGC TGATCTAA
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| Protein sequence | MQIKLANPRG FCAGVDRAIE IVNRALEVFG PPIYVRHEVV HNKFVVEDLR NRGAIFVEEL
DQVPDDVIVI FSAHGVSQAV RQEAAGRGLK VFDATCPLVT KVHIEVAKYS RDGRECILIG
HEGHPEVEGT MGQYDASNGG AIYLVEDEED VANLQVRDPN HLAFVTQTTL SMDDTSRVID
ALRARFPNIG GPRKDDICYA TQNRQDAVKQ LAGESDVVLV VGSPNSSNSN RLRELAERMG
TPAYLIDGAE DMQRGWFDQT ARIGITAGAS APEVLVRGVI EQLKAWGATG AEELDGREEN
ITFSMPKELR VRSLI
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