Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0644 |
Symbol | ileS |
ID | 5190472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 729318 |
End bp | 732149 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585099 |
Product | isoleucyl-tRNA synthetase |
Protein accession | YP_001265996 |
Protein GI | 148545894 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0060] Isoleucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.151941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACT ACAAAGCCAC GCTTAACCTT CCGGACACCG CCTTCCCCAT GAAGGCCGGC CTGCCTCAGC GCGAACCGCA GATCCTGCAG CGCTGGGACA GCATTGGCCT GTACCAGAAG CTGCGCGAAA TTGGCAAGGA TCGTCCCAAG TTCGTCCTGC ACGACGGCCC GCCCTATGCC AACGGCAAGA TTCACATCGG TCATGCGCTG AACAAGATCC TCAAGGACAT GATCGTCCGT TCCAAGACCC TGGCCGGCTT CGATGCGCCG TATGTACCGG GCTGGGACTG CCATGGCCTG CCGATCGAGC ACAAGGTCGA GGTTACCCAC GGCAAGCACC TCTCCGCCGA CCGCACCCGC GAGCTGTGCC GCGAGTACGC TGCCGAGCAG ATCGAAGGGC AGAAGACCGA GTTCATCCGC CTGGGCGTGC TGGGTGACTG GGACAACCCA TACAAGACCA TGAACTTCGC CAACGAGGCC GGTGAAATCC GCGCCCTGGC CGAGATGGTC AAGCAAGGCT TCGTGTTCAA GGGCCTGAAG CCGGTGAACT GGTGCTTTGA TTGCGGTTCG GCGCTGGCTG AAGCGGAAGT CGAGTACGCC GACAAGAAGT CGCAGACCAT CGACGTGGCC TTCCCGGTTG CCGATGAGGC CAAGCTGGCC GCCGCCTTCG GTCTGGCCTC GCTGACCAAG CCGGCCGCCA TCGTGATCTG GACCACCACC CCGTGGACCA TCCCGGCCAA CCAGGCCCTG AACATCCACC CGGAATTCAA GTACGCCCTG GTCGACACCG GCGAGCGCCT GCTGGTGCTG GCTGAAGAGC TGGTCGAGTC GTGCCTGAAG CGCTACAACC TGGAAGGTTC GGTTGTTGCC ACCGCCCAAG GTTCGGCGCT GGAGCTGATC AACTTCCGCC ATCCGTTCTA CGATCGCCTG TCGCCAATCT ACCTGGCCGA CTACGTCGAG CTGGGTGCCG GTACCGGCGT GGTGCATTCC TCGCCAGCCT ACGGTGAAGA CGACTTCGTC ACCTGCAAGC GCTACGGCAT GGTCAACGAC GACATCCTTA CCCCGGTGCA GAGCAACGGC GTGTATGTCG AGTCGCTGCC ATTCTTCGGC GGCCAGTTCA TCTGGAAGGC CAACCCGGCC ATCGTCGAGA AACTGAGCGA AGTCGGTGCG CTGATGCACA CCGAAACCAT CAGCCACAGC TATATGCACT GCTGGCGCCA CAAGACCCCG CTGATCTACC GCGCCACCGC GCAGTGGTTC GTGGGCATGG ACAAGCAGCC GAGCACCGGC GAGCCGCTGC GTGAGCGTGC GCTGAAAGCC ATCGAAGACA CCAAGTTCGT CCCGGCCTGG GGCCAGGCGC GCCTGCACGC GATGATCGCC AACCGCCCGG ACTGGTGCAT CTCGCGTCAG CGCAACTGGG GTGTGCCGAT CCCGTTCTTC CTGCACAAGC AGACCGGCGA GCTGCATCCG CGCACTGTCG AACTGATGGA AGAAGTGGCC AAGCGTGTCG AGCAGCAAGG CATCGAGGCC TGGTTCAAGC TGGACGCCGC CGAACTGCTG GGCGCTGAAG CCGATCAGTA CGACAAGATC GCTGACACCC TCGACGTGTG GTTCGACTCC GGTACCACCC ACTGGCACGT ACTGCGTGGC TCGCACGACA TCGGCCACGC CACCGGCCCG CGCGCTGACC TGTACCTGGA AGGTTCCGAC CAACACCGCG GCTGGTTCCA CTCGTCCTTG CTGACCGGTT GCGCCATCGA CAACCACGCG CCGTACCGCG AGCTGCTGAC CCACGGCTTC ACCGTGGACG AGAACGGCCG CAAGATGTCC AAGTCGCTGG GTAACACCAT CGAGCCGGAG AAGGTCAACA ACACCCTGGG TGCCGATATC CTGCGCCTGT GGGTTTCGGC CACCGACTAT TCCGGTGAAA TGGCGGTTTC CGAGCAGATC CTGCAGCGCA GCGCCGATGC TTACCGGCGT ATCCGTAATA CCGCGCGTTT CCTGCTTTCC AACCTGTCCG GCTTCGACCC GGCCCGCGAC CTGCTGGCCT CGGAAGACAT GCTGGCGCTG GACCGCTGGG CCGTGGACCG CACCCTGCTG CTGCAACGCG AGCTGGAAGA GCACTACAGC GAGTACCGTT TCTGGAACGT CTACTCCAAA GTGCACAACT TCTGCGTACA GGAACTGGGC GGCTTCTACC TCGACATCAT CAAGGACCGC CAGTACACCA CCGGCGCCAA CAGTGTCGCC CGCCGTTCCT GCCAGACCGC GCTGTTCCAC ATCAGCGAAG CGTTGGTGCG CTGGATCGCG CCGATCCTGG CATTCACTGC CGACGAAATC TGGCAGTACC TGCCGGGCGA GCGCAACGAG TCGGTCATGC TCAACGGCTG GTACCAAGGC CTGAGCGAGC TGCCGGAAGG CACCGAGTTG GACCGCGCCT ACTGGGACCG CGTGATGGCA GTGAAGGCAT CGGTCAACAA GGAGCTGGAA AACCAGCGCA CCGCCAAGGT CATCGGCGGC AACCTGCAAG CCGAAGTGAC CCTGTACGCC GACGAAGGCC TGAGTGCCGA CCTGGGCAAG CTGGGCGACG AGCTGCGCTT CGTGCTGATC ACCTCGGCCG CTAGCGTGGT GCCGTTCGCA CAGGCGCCGG CCGAAGCCGT AGCCACCGAA GTCGAAGGCC TCAAGCTGAA AGTGGTCAAG TCCGGCCACG CCAAGTGCGG CCGTTGCTGG CACTTCCGCG CCGATGTCGG CAGCCACCCG GAGCACCCGG AAATCTGCAG CCGTTGTGTC GACAACCTGA GCGGCCAGGG TGAGGTGCGC CACTATGCCT AA
|
Protein sequence | MTDYKATLNL PDTAFPMKAG LPQREPQILQ RWDSIGLYQK LREIGKDRPK FVLHDGPPYA NGKIHIGHAL NKILKDMIVR SKTLAGFDAP YVPGWDCHGL PIEHKVEVTH GKHLSADRTR ELCREYAAEQ IEGQKTEFIR LGVLGDWDNP YKTMNFANEA GEIRALAEMV KQGFVFKGLK PVNWCFDCGS ALAEAEVEYA DKKSQTIDVA FPVADEAKLA AAFGLASLTK PAAIVIWTTT PWTIPANQAL NIHPEFKYAL VDTGERLLVL AEELVESCLK RYNLEGSVVA TAQGSALELI NFRHPFYDRL SPIYLADYVE LGAGTGVVHS SPAYGEDDFV TCKRYGMVND DILTPVQSNG VYVESLPFFG GQFIWKANPA IVEKLSEVGA LMHTETISHS YMHCWRHKTP LIYRATAQWF VGMDKQPSTG EPLRERALKA IEDTKFVPAW GQARLHAMIA NRPDWCISRQ RNWGVPIPFF LHKQTGELHP RTVELMEEVA KRVEQQGIEA WFKLDAAELL GAEADQYDKI ADTLDVWFDS GTTHWHVLRG SHDIGHATGP RADLYLEGSD QHRGWFHSSL LTGCAIDNHA PYRELLTHGF TVDENGRKMS KSLGNTIEPE KVNNTLGADI LRLWVSATDY SGEMAVSEQI LQRSADAYRR IRNTARFLLS NLSGFDPARD LLASEDMLAL DRWAVDRTLL LQRELEEHYS EYRFWNVYSK VHNFCVQELG GFYLDIIKDR QYTTGANSVA RRSCQTALFH ISEALVRWIA PILAFTADEI WQYLPGERNE SVMLNGWYQG LSELPEGTEL DRAYWDRVMA VKASVNKELE NQRTAKVIGG NLQAEVTLYA DEGLSADLGK LGDELRFVLI TSAASVVPFA QAPAEAVATE VEGLKLKVVK SGHAKCGRCW HFRADVGSHP EHPEICSRCV DNLSGQGEVR HYA
|
| |