Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0641 |
Symbol | rpsT |
ID | 5191853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 726185 |
End bp | 726463 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640585096 |
Product | 30S ribosomal protein S20 |
Protein accession | YP_001265993 |
Protein GI | 148545891 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0268] Ribosomal protein S20 |
TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.647122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.196215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAACA CACCTTCCGC CAAGAAACGT GCAAAACAGG CTGAGAAGCG TCGCAGCCAC AACGCCAGCC TGCGTTCCAT GGTCCGCACC TACATCAAGA ATGTAGTTAA AGCCATCGAC GCAAAAGACG CCGAAAAAGC GCAAGCCGCT TACGTTCTGG CTGTACCTGT AATCGACCGT ATGGCCGACA AGGGTATCAT CCACAAGAAC AAGGCTGCTC GTCACAAAGG CCGTCTGAAT GGCCACATCA AGGCGCTGAA AGAAGCTGCA GCTGCCTAA
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Protein sequence | MANTPSAKKR AKQAEKRRSH NASLRSMVRT YIKNVVKAID AKDAEKAQAA YVLAVPVIDR MADKGIIHKN KAARHKGRLN GHIKALKEAA AA
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