| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0622 |
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| Symbol | |
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| ID | 5190750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 699592 |
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| End bp | 700371 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585074 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001265974 |
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| Protein GI | 148545872 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCA TCGGACACCC CCGCGCTATC CCCGCGCTGG ACCACCTGCC CAGACCGCTC
TACGCCCGTG CCGAAAGCCT TGGCGCCGGT TCGTGGACTA CCCGCCACCA GCACGACTGG
GTGCAGTTCT CCTACGCCAT CAGCGGTGTA CTCGGCGTGT ACACACGCGA CGGCAGTTAC
TTCGCCCCAC CGCAGTGGGG GGTGTGGATC CCTGCCGATG CCGAGCATGA AGTGGTCACC
TCGATGCAAG CCGAGATGCG CAGCCTGTAT GTGCGCCGTG ATGCCTGCCC ATGGGCGCCG
GAACAATGCC GAGTGCTGGA AGTCACGCCG CTGGCGCGCG AGCTGATCAA GCAGTTCTGC
CTGTTCCCGG CAGATTACCC AGAGGACGAC AGCGCCGAAT CGCGTCTGGT GGCAGTGCTG
CTCGATCAGT TGCGCACCTT GCCGGAAGTC GGTTTTTCGC TGCCGTTGCC CCGCCACCCT
GGTTTGCTGG CGCTGTGCAA TGGCTTGATC GCTGCACCAG ACCAGCCGCA GACCTTGCAG
CAATGGGCGC GGGAGCTGGG GTGTTCGGAG AAGACACTGA TGCGGCTGTT TCAACGGGAA
ACCGGGTTGA GCTTTCGTAA TTGGCGCCAG CGCATGCGGC TGTTGTCTTC GCTGGCGTTG
TTGGAGGCGG GGGAGAATGT GACTGAGGCG GCGCTGGGGT GTGGGTATGA CTCCACGTCG
GCCTACATTG CGGCGTTCAA GCAGCTGTTT GGCGCGACAC CGGGGGAATT GAAGCTCTGA
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| Protein sequence | MPIIGHPRAI PALDHLPRPL YARAESLGAG SWTTRHQHDW VQFSYAISGV LGVYTRDGSY
FAPPQWGVWI PADAEHEVVT SMQAEMRSLY VRRDACPWAP EQCRVLEVTP LARELIKQFC
LFPADYPEDD SAESRLVAVL LDQLRTLPEV GFSLPLPRHP GLLALCNGLI AAPDQPQTLQ
QWARELGCSE KTLMRLFQRE TGLSFRNWRQ RMRLLSSLAL LEAGENVTEA ALGCGYDSTS
AYIAAFKQLF GATPGELKL
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