| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0611 |
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| Symbol | |
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| ID | 5191061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 687667 |
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| End bp | 690021 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640585063 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001265963 |
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| Protein GI | 148545861 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.585704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCT TAGCGCGACC ACGGTGCCGT GCGGGCAGGT TGTTGCGTGC CACGCTGATC
AGTCTGCTGG TGCTCGGCAG CCTGTTCTGG CTGGCTGATC GTATCTGGCC GCTGCCGCTG
CCGGGTGATG ACCTGGCCCG GGTAGTGCTG GCCGAAGACG GCACGCCCTT GTGGCGCTTT
GCCGATGCTG ATGGCGTGTG GCGCTACCCC GTCAGCCCTG AAGAGGTTTC GCCGCTTTAC
CTGCAGGCTT TGCTGACTTA TGAGGACCGT TGGTTCTACA ACCACCCAGG GGTCAACCCC
CTGGCATTGG TCCGCGCGGC CTGGCTGAAC CTGCGCGGCG GGCGTGTTGT GTCGGGCGGC
AGCACATTGT CGATGCAGGT GGCACGCCTG CTCGACCCGC ACGACCGTAC CTTGGTCGGC
AAACTGCGCC AGCTATGGCG CACCTTGCAG CTGGAATGGC ACTTGTCCAA GCGCGACATC
CTGCAGATCT ACCTGAACCG CGCACCTTTC GGCGGCACGC TTCAGGGCGT GGCGGCAGCC
AGCTGGGCGT ACCTGGGCAA GTCGCCCCTG CACCTGACAC CTGCCGAAGC GGCACTGCTG
GCCGTGTTGC CCCAGGCACC CAGCCGGCTG CGCCCGGACC GCCACCCCGA GCGTGCCCAG
CGTGCCCGGG ACAAGGTGCT GCAGCGCCTG GCTGAGTACC AGGTATGGCC GGCCCAGCAA
ATTCGCGAGG CGGCCGAGGA GCCGCTGGTG TTGGCGCCAC GCCAGGAGCC GGCCCTGGCG
CCATTGTTGG CCCGGCGCCT GAACAGCGCT GACAGCCCGC CGCTGATCCG TACCACGCTT
GACGCTGCGC TTCAGCGGCG CCTCGAAGAC TTGCTGCTGG GCTGGCGCGC ACGGCTGCCG
GAGCGTACCT CGGCCGCCAT TCTGGTGGTC GAAGCGCAGA GCATGGCGGT GCGCGCGTAC
CTGGGCTCGA TAGATTTGTC TGATGAGCGC CGCTTTGGCC ATGTCGACAT GGTGCGCTCG
TTACGTTCGC CCGGCTCCAC CCTCAAGCCG TTTCTTTACG GCATGGCGCT GGACGATGGC
CTGATCCATT CCGAATCGCT GTTGCAGGAT GTTCCACGAC GCTATGGCGA CTATCGCCCT
GGCAACTTCT CCATGGGGTT CAGCGGGCCG GTGTCGGCCA GCTCGGCGCT GGCCCTGTCG
CTCAACCTGC CCGCCGTGCA ATTGCTGGAG GCCTACGGCC CGAAACGCTT TGCCGCACAA
CTGCGCATGG CGGGCATGCC GTTGATACTG CCACCCCTTG CCGAGCCCAA CCTGTCGTTG
ATCCTGGGCG GTGCCGGCAG CCGGCTGGAG GACCTGGTCG GCGGCTACGC GGCGCTGGCG
CGGGGTGGCG ACAGTGCGCA GGTGCGCTTG CAGCCACAGG CCCCCTTGGT GGAGCACCGG
TTGCTGTCAC CGGGGGCGGC GTGGATCATC CGGCGTATCC TCAGTGGCCA GGCGCGCCCG
GACCGCGACC CGCACGCCGA ACTGGTGCAG CGCCCGCTAC TGGCATGGAA AACCGGCACC
AGCTACGGCT TTCGCGATGC CTGGTCGATT GGCGTGGGGC CGCGTTACCT GATCGGCGTA
TGGATTGGCC GCCCCGACGG TACACCGGTG CCTGGGCAGT TCGGCCTGGC CTCGGCGGCG
CCGCTGATGT TGCAGGTGCA CGATCTGTTG AGCAATCGCG ACAGCCAACG CGGCATCAGC
GTCCCGGTAG CGCCGGTACC TGCGAATATC GGCGTTGCGG CGATCTGTTG GCCGCTGGGC
CAGCCGATGA GCAAGCAGGA CACCAACTGT CGGCGTCAGC GCTTTGCATG GACCCTGGAC
GGCACCACGC CACCCACCTT GCAGGCAGCC GACCAGCCGC TGGGCCTGGG CTTGCGCGAA
AAAGTGTGGG TCAACGAGCA GGGCTTGCGG GTCGATGGTA GCTGCCCGGG CGCCAAGGCG
CGTGACATCG CCCTGTGGCC GGCACCGCTG GAGCCTTGGC TCCCCCGTGT CGAGCGGCGC
ATGGCACGTT TGCCGGCCAT CGACCCGGCC TGCCCGCCGC AGGCGCCGGC CAGTGCACCA
CCGCTGTCGA TTGTCGGCGT GCGCCCAGGC GACAATCTGC GCCGCCCGGC CACCAGCACT
GAGCCGTTGC AATTGCAGGT CTCTGCCTTG GGGGGTGGTG GACGGCGCTG GTGGTTCCTC
AACGGCCAGC CGTTGGGTGA AACCCAGGGG CAGGACAGCC TGTTGCTGCG TTTGCCACAG
GTCGGGCAGG CCGAACTCAG CGCGTTGGAC GAAAGCGGTC AGACGGCGCG GGTGGCGTTC
CAGGTCAGTG AGTAG
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| Protein sequence | MPSLARPRCR AGRLLRATLI SLLVLGSLFW LADRIWPLPL PGDDLARVVL AEDGTPLWRF
ADADGVWRYP VSPEEVSPLY LQALLTYEDR WFYNHPGVNP LALVRAAWLN LRGGRVVSGG
STLSMQVARL LDPHDRTLVG KLRQLWRTLQ LEWHLSKRDI LQIYLNRAPF GGTLQGVAAA
SWAYLGKSPL HLTPAEAALL AVLPQAPSRL RPDRHPERAQ RARDKVLQRL AEYQVWPAQQ
IREAAEEPLV LAPRQEPALA PLLARRLNSA DSPPLIRTTL DAALQRRLED LLLGWRARLP
ERTSAAILVV EAQSMAVRAY LGSIDLSDER RFGHVDMVRS LRSPGSTLKP FLYGMALDDG
LIHSESLLQD VPRRYGDYRP GNFSMGFSGP VSASSALALS LNLPAVQLLE AYGPKRFAAQ
LRMAGMPLIL PPLAEPNLSL ILGGAGSRLE DLVGGYAALA RGGDSAQVRL QPQAPLVEHR
LLSPGAAWII RRILSGQARP DRDPHAELVQ RPLLAWKTGT SYGFRDAWSI GVGPRYLIGV
WIGRPDGTPV PGQFGLASAA PLMLQVHDLL SNRDSQRGIS VPVAPVPANI GVAAICWPLG
QPMSKQDTNC RRQRFAWTLD GTTPPTLQAA DQPLGLGLRE KVWVNEQGLR VDGSCPGAKA
RDIALWPAPL EPWLPRVERR MARLPAIDPA CPPQAPASAP PLSIVGVRPG DNLRRPATST
EPLQLQVSAL GGGGRRWWFL NGQPLGETQG QDSLLLRLPQ VGQAELSALD ESGQTARVAF
QVSE
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