| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0608 |
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| Symbol | |
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| ID | 5192863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 680626 |
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| End bp | 681963 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640585060 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001265960 |
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| Protein GI | 148545858 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAC TCGCTGCCGA CTGGCGCCAC CGCCCCACCC ACCGCAAGGT CTGGGCGCTG
GCCGCGCCGA TGATCCTGTC CAACATCTCG GTACCGCTGG TGGCGCTGGT CGACAGCACG
GTCATCGGTC ATCTCCCGCA CGCCCACCAA CTGGGCGCCG TGGCCGTGGG CGCCACCTTG
TTCACCTTCA TGGTCGGCCT GATGGGCTTC CTGCGCATGG GGTCCACCGG CTTCGCTGCC
CAGGCCGCCG GCCGTGGCGA CGGTGCAGCG CTACGCCAGG TACTGATGCA AGGGCTGCTG
CTGGCGGTCG GCTTCGCCCT GTTGATCGGC CTGCTGGCCC TGCCCTTCAG CCAGCTGGCA
CTCCATGCGA TGCAACCCAG CGCAGCCCTG CAGCAATCCA CCGAAGACTT CTTCCATACC
CGCCTGCTTG GCCTGCCTGC GGCGCTGGCC AGTTACGCGC TGGTCGGCTG GTTCCTCGGC
ACCCAGAACG CCAGGGCGCC ACTGGCCATC CTGCTGACCA CCAACCTGCT GAACATCGCC
TTGAACCTGT GGTTCGTGCT GGGCCTGGAC TGGGGTGTAC TGGGCTCGGC GCGGGCGTCG
GTAATTGCCG AATGGAGTGC CGCCCTGCTC GGTTTGGCCC TGACCCGCCC GGCCCTGCGG
GCTTACCCGG GGCAGATCGT GTGGGCAGCG CTCAAGCGCT GGCAGGCCTG GAGGCCACTG
CTGGCGGTGA ACCGCGACAT CTTCCTGCGT AGCCTGGCAC TGCAACTGGT GTTCCTGCTG
ATTACCGTGC AGGGCGCGCG TCTGGGTGAA GCGACCGTGG CGGCCAACGC CCTGTTGCTC
AATGGCCTGC TACTGACGGC CTATGCGCTG GATGGGCTGG CCCATGCGGT GGAGGCCTTG
TGCGGCCATG CCATTGGTGC CCGTGACCGC GACACCTTGC GCCGCTCGCT GGTGGTCGCT
TGTGGTTGGT CACTGATCAC CAGCGTGGGG TTTGCCGGGC TGTTCCTGCT GGGTGGACAC
CTGTTCATCG ACTTGCAGAC TGATATCGAC AGTGTGCGGG CGGCGGCTTA TCCGTATTTG
CCCTACCTGG CGTTGCTGCC GTTGATCGCG GTGTGGAGTT ACTTGCTGGA TGGCTTGTTC
ATCGGCGCGA CCCGGGCGCG GGAAATGCGT AATGCAATGC TGGTTTCGGT GTTGATTGCG
CTGCCGGTGG CACTGGCCAT GAGCGGGTTG GGCAACCATG GGTTGTGGAT GGCGTTTCTT
GGGTTCATGG GGTTGCGGGC GGTGACGTTG GGGTGGGTCG GGTGGCGGTT GCAGCAGAGA
GACCTGTGGT TTGGCTGA
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| Protein sequence | MPQLAADWRH RPTHRKVWAL AAPMILSNIS VPLVALVDST VIGHLPHAHQ LGAVAVGATL
FTFMVGLMGF LRMGSTGFAA QAAGRGDGAA LRQVLMQGLL LAVGFALLIG LLALPFSQLA
LHAMQPSAAL QQSTEDFFHT RLLGLPAALA SYALVGWFLG TQNARAPLAI LLTTNLLNIA
LNLWFVLGLD WGVLGSARAS VIAEWSAALL GLALTRPALR AYPGQIVWAA LKRWQAWRPL
LAVNRDIFLR SLALQLVFLL ITVQGARLGE ATVAANALLL NGLLLTAYAL DGLAHAVEAL
CGHAIGARDR DTLRRSLVVA CGWSLITSVG FAGLFLLGGH LFIDLQTDID SVRAAAYPYL
PYLALLPLIA VWSYLLDGLF IGATRAREMR NAMLVSVLIA LPVALAMSGL GNHGLWMAFL
GFMGLRAVTL GWVGWRLQQR DLWFG
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