| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0596 |
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| Symbol | |
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| ID | 5195323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 665166 |
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| End bp | 667019 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640585048 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001265948 |
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| Protein GI | 148545846 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCCG CGAACTCCCG AGCCCATGTG GACTGCGTCA GCAGGGTGTT GAAGAATGCC
GACCGCCTGC CGCAGGCGCC GGTACCACCG CTGATCCTCG ATTCATGGCG CCGCTCCATG
GATGTGTACC GCCTCGACCC CGGTTCCCAG CAGGGGCCGC GTATCCTTTC CCAAAGCCTG
CTCAACGAAT GCCGCGAACG CGCCGAGCTG TTCCTGCGCA TCGCCAGCGA TGCCGTGGCG
CGCTTGCACG AACGGGTGCG CGGCGCTGAC TACTGCGTGC TGCTTACCGA TGCCCAGGGG
CGCACCATTG ATTACCGGGT CGAGTCGGCC ATCCGCAACG ACTGTCGCAA GGCTGGGCTG
TATCTGGGGA CCTGCTGGTC GGAGGGCGAG GAGGGCACAT GCGGTGTGGC GGCGGTGCTG
ACCAGCAAGG CCCCGATCAC GGTGCACAAG CGCGATCACT TTCGCGCCGC CTTCATCGGC
CTGACCTGCA CAGCGGCGCC GGTGTTCGAC CCGTTGGGCG AGTTGCTGGG CGTGGTCGAT
GTGTCGGCCT TGCAGTCGCC GGACGATCGG CGCAGCCAGC ACCTGATCCG CCAACTGGTC
GAGCAGACCG CCCGCGAGAT CGAAAACGCT TTCTTCATGC ACAGCGCCCA GGGCCACTGG
GTGATGCGCG CGCATGGCAC GCCGGGCTAT GTGGAGAGCC AACCCGATTA CCTGCTGGCC
TGGGATGCCG ATGGCCGCTT GCAGGCAATC AACAGCCTGG CGCGGCAACG GTTGGTGGAA
CGCCTGGGGC GCTTGCCTGA GCATATTGGC GAACTGTTCG ACATCGACCA ACTGCGCCGG
GTGAGCGCGT CGTCCGCCCA GCGCCTGCCT GGTCTGGGCG GTTTGTATGG CCGGGTCAGC
GCACCGCAGC AACGCCAGCG TGCGCAGCCT TTGCGCCAGG CCCAGGACAC CCGTATCGAG
CAACACCTGC GGTTGGCCAC GCGGGTCAAG GACTGCAACC TGGCGGTGCT GGTACTGGGT
GAGACCGGGG CCGGCAAGGA GGTATTCGCC CGCCAGCTGC ACCAGCAAAG CCAGCGCTGT
GATGGCCCGT TCGTTACCCT GAACTGCGCG GCCATTCCGG AAACCTTGAT CGAGAGCGAG
TTGTTCGGCT ATGTGGCCGG GGCCTTCACC GGGGCTTCCA GCAAAGGCAT GCAAGGGCTG
TTGCAGCAGG CCGATGGCGG CACGCTGTTC CTCGACGAGA TCGGGGACAT GCCGCTGAAC
CTGCAAACCC GCCTGCTGCG GGTGCTGGCG GAGGGCGAGG TGGCGCCGCT GGGGGCGGCG
CGGCGGGAGC GGGTGGATAT TCAGGTGATC TGTGCGACCC ATCGCGATCT GGCGGCGATG
GTGGAGGACG GGCGATTTCG TGAAGACTTG TACTTCCGCC TGGCCAATGC CCGCTTTGAG
CTACCCCCCT TGCGTGAGCG TGATGACCGG CTGGGGCTGA TTCACCAGTT GCTGGCCGAA
GAGGCTGCGG CCTGCGGGGT GGAGGTGGTG TTGGCGGATG ACGCGCTGCA GGCGCTGCTG
GTTTATCGCT GGCCGGGCAA TTTGCGCCAA CTGCGGCAGG TGTTGCGGTA TGCCTGTGCG
GTGAGTGAAG GCGGGCAGGT ACGGCTTCAG GATCTGCCGC AGGAGGTGCG CGGTGAAGCA
GTTGGCTCGG CTGAAAGCGG GGTGTCGTGC CCGGCACGGC AGCTGTTGCT GGACGCGCTG
ATTCGCCATC GCTGGAAGCC GGCTGATGCG GCGCGGGCTT TGGGTATTTC GCGGGCGACG
CTTTATCGGC GAGTGCATGA GCATCGCATC GACATGCCGC GGATGAAGGG GTAG
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| Protein sequence | MLAANSRAHV DCVSRVLKNA DRLPQAPVPP LILDSWRRSM DVYRLDPGSQ QGPRILSQSL
LNECRERAEL FLRIASDAVA RLHERVRGAD YCVLLTDAQG RTIDYRVESA IRNDCRKAGL
YLGTCWSEGE EGTCGVAAVL TSKAPITVHK RDHFRAAFIG LTCTAAPVFD PLGELLGVVD
VSALQSPDDR RSQHLIRQLV EQTAREIENA FFMHSAQGHW VMRAHGTPGY VESQPDYLLA
WDADGRLQAI NSLARQRLVE RLGRLPEHIG ELFDIDQLRR VSASSAQRLP GLGGLYGRVS
APQQRQRAQP LRQAQDTRIE QHLRLATRVK DCNLAVLVLG ETGAGKEVFA RQLHQQSQRC
DGPFVTLNCA AIPETLIESE LFGYVAGAFT GASSKGMQGL LQQADGGTLF LDEIGDMPLN
LQTRLLRVLA EGEVAPLGAA RRERVDIQVI CATHRDLAAM VEDGRFREDL YFRLANARFE
LPPLRERDDR LGLIHQLLAE EAAACGVEVV LADDALQALL VYRWPGNLRQ LRQVLRYACA
VSEGGQVRLQ DLPQEVRGEA VGSAESGVSC PARQLLLDAL IRHRWKPADA ARALGISRAT
LYRRVHEHRI DMPRMKG
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