Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0596 |
Symbol | |
ID | 5195323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 665166 |
End bp | 667019 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640585048 |
Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
Protein accession | YP_001265948 |
Protein GI | 148545846 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCCG CGAACTCCCG AGCCCATGTG GACTGCGTCA GCAGGGTGTT GAAGAATGCC GACCGCCTGC CGCAGGCGCC GGTACCACCG CTGATCCTCG ATTCATGGCG CCGCTCCATG GATGTGTACC GCCTCGACCC CGGTTCCCAG CAGGGGCCGC GTATCCTTTC CCAAAGCCTG CTCAACGAAT GCCGCGAACG CGCCGAGCTG TTCCTGCGCA TCGCCAGCGA TGCCGTGGCG CGCTTGCACG AACGGGTGCG CGGCGCTGAC TACTGCGTGC TGCTTACCGA TGCCCAGGGG CGCACCATTG ATTACCGGGT CGAGTCGGCC ATCCGCAACG ACTGTCGCAA GGCTGGGCTG TATCTGGGGA CCTGCTGGTC GGAGGGCGAG GAGGGCACAT GCGGTGTGGC GGCGGTGCTG ACCAGCAAGG CCCCGATCAC GGTGCACAAG CGCGATCACT TTCGCGCCGC CTTCATCGGC CTGACCTGCA CAGCGGCGCC GGTGTTCGAC CCGTTGGGCG AGTTGCTGGG CGTGGTCGAT GTGTCGGCCT TGCAGTCGCC GGACGATCGG CGCAGCCAGC ACCTGATCCG CCAACTGGTC GAGCAGACCG CCCGCGAGAT CGAAAACGCT TTCTTCATGC ACAGCGCCCA GGGCCACTGG GTGATGCGCG CGCATGGCAC GCCGGGCTAT GTGGAGAGCC AACCCGATTA CCTGCTGGCC TGGGATGCCG ATGGCCGCTT GCAGGCAATC AACAGCCTGG CGCGGCAACG GTTGGTGGAA CGCCTGGGGC GCTTGCCTGA GCATATTGGC GAACTGTTCG ACATCGACCA ACTGCGCCGG GTGAGCGCGT CGTCCGCCCA GCGCCTGCCT GGTCTGGGCG GTTTGTATGG CCGGGTCAGC GCACCGCAGC AACGCCAGCG TGCGCAGCCT TTGCGCCAGG CCCAGGACAC CCGTATCGAG CAACACCTGC GGTTGGCCAC GCGGGTCAAG GACTGCAACC TGGCGGTGCT GGTACTGGGT GAGACCGGGG CCGGCAAGGA GGTATTCGCC CGCCAGCTGC ACCAGCAAAG CCAGCGCTGT GATGGCCCGT TCGTTACCCT GAACTGCGCG GCCATTCCGG AAACCTTGAT CGAGAGCGAG TTGTTCGGCT ATGTGGCCGG GGCCTTCACC GGGGCTTCCA GCAAAGGCAT GCAAGGGCTG TTGCAGCAGG CCGATGGCGG CACGCTGTTC CTCGACGAGA TCGGGGACAT GCCGCTGAAC CTGCAAACCC GCCTGCTGCG GGTGCTGGCG GAGGGCGAGG TGGCGCCGCT GGGGGCGGCG CGGCGGGAGC GGGTGGATAT TCAGGTGATC TGTGCGACCC ATCGCGATCT GGCGGCGATG GTGGAGGACG GGCGATTTCG TGAAGACTTG TACTTCCGCC TGGCCAATGC CCGCTTTGAG CTACCCCCCT TGCGTGAGCG TGATGACCGG CTGGGGCTGA TTCACCAGTT GCTGGCCGAA GAGGCTGCGG CCTGCGGGGT GGAGGTGGTG TTGGCGGATG ACGCGCTGCA GGCGCTGCTG GTTTATCGCT GGCCGGGCAA TTTGCGCCAA CTGCGGCAGG TGTTGCGGTA TGCCTGTGCG GTGAGTGAAG GCGGGCAGGT ACGGCTTCAG GATCTGCCGC AGGAGGTGCG CGGTGAAGCA GTTGGCTCGG CTGAAAGCGG GGTGTCGTGC CCGGCACGGC AGCTGTTGCT GGACGCGCTG ATTCGCCATC GCTGGAAGCC GGCTGATGCG GCGCGGGCTT TGGGTATTTC GCGGGCGACG CTTTATCGGC GAGTGCATGA GCATCGCATC GACATGCCGC GGATGAAGGG GTAG
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Protein sequence | MLAANSRAHV DCVSRVLKNA DRLPQAPVPP LILDSWRRSM DVYRLDPGSQ QGPRILSQSL LNECRERAEL FLRIASDAVA RLHERVRGAD YCVLLTDAQG RTIDYRVESA IRNDCRKAGL YLGTCWSEGE EGTCGVAAVL TSKAPITVHK RDHFRAAFIG LTCTAAPVFD PLGELLGVVD VSALQSPDDR RSQHLIRQLV EQTAREIENA FFMHSAQGHW VMRAHGTPGY VESQPDYLLA WDADGRLQAI NSLARQRLVE RLGRLPEHIG ELFDIDQLRR VSASSAQRLP GLGGLYGRVS APQQRQRAQP LRQAQDTRIE QHLRLATRVK DCNLAVLVLG ETGAGKEVFA RQLHQQSQRC DGPFVTLNCA AIPETLIESE LFGYVAGAFT GASSKGMQGL LQQADGGTLF LDEIGDMPLN LQTRLLRVLA EGEVAPLGAA RRERVDIQVI CATHRDLAAM VEDGRFREDL YFRLANARFE LPPLRERDDR LGLIHQLLAE EAAACGVEVV LADDALQALL VYRWPGNLRQ LRQVLRYACA VSEGGQVRLQ DLPQEVRGEA VGSAESGVSC PARQLLLDAL IRHRWKPADA ARALGISRAT LYRRVHEHRI DMPRMKG
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