| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0594 |
|---|
| Symbol | |
|---|
| ID | 5194628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 662827 |
|---|
| End bp | 663804 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640585046 |
|---|
| Product | pyruvate dehydrogenase (acetyl-transferring) |
|---|
| Protein accession | YP_001265946 |
|---|
| Protein GI | 148545844 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATC AACTCAGTAC TGATCAACTG CTGCATGCCT ATGAAGTCAT GCGGACCATC
CGCGCCTTCG AAGAACGCCT GCATGTGGAG TTCGCCACCG GCGAAATTCC CGGCTTCGTC
CACCTGTATG CCGGCGAGGA AGCCTCTGCA GCCGGGGTCA TGGCCCACCT GCGCGACAGC
GACTGCATCG CCTCGACCCA CCGCGGCCAT GGCCACTGCA TCGCCAAAGG GGTGGACGTG
TACGGCATGA TGGCCGAGAT CTACGGCAAG AAAACCGGCG TGTGCGGCGG CAAGGGCGGC
TCGATGCACA TTGCCGACCT GGAAAAAGGC ATGCTCGGTG CCAACGGTAT CGTCGGCGCC
GGCGCACCAC TGGTGGCCGG GGCGGCGCTG GCGGCCAAGC TCAAGGGCCG CGATGACGTG
TCGGTAGCCT TCTTCGGCGA TGGGGCATCC AACGAGGGCG CCGTGTTCGA GGCCATGAAC
ATGGCGTCGA TCATGAACCT GCCCTGCATC TTCGTGGCCG AGAACAACGG CTACGCCGAG
GCCACTGCCT CCAACTGGTC CGTAGCCTGC GACCACATTG CCGACCGCGC TGCCGGCTTC
GGCATGCCAG GCGTCACCAT CGACGGCTTT GACTTCTTTG CCGTCTACGA GGCCGCCGGC
GCTGCCATCG AGCGCGCCCG CTCCGGGCAA GGGCCGTCGC TGATCGAGGT CAAGCTCAGC
CGTTACTACG GCCATTTCGA AGGCGATGCG CAAACCTACC GCGCCCCTGA TGAAGTGAAG
AACCTGCGCG AATCCCGCGA CTGCCTCATG CAATTTCGCA ACAAGACCAC CCGCGCCGGC
CTGCTCAAGG CCGAGCAACT GGACGCCATC GACGCCCGCG TCGAGGACCT GATCGAAGAC
GCCGTACGCC GCGCCAAATC CGATCCCAAG CCACAGCCCG CCGACCTGCT CACCGACGTC
TACGTCGCCT ACCCCTGA
|
|---|
| Protein sequence | MSNQLSTDQL LHAYEVMRTI RAFEERLHVE FATGEIPGFV HLYAGEEASA AGVMAHLRDS
DCIASTHRGH GHCIAKGVDV YGMMAEIYGK KTGVCGGKGG SMHIADLEKG MLGANGIVGA
GAPLVAGAAL AAKLKGRDDV SVAFFGDGAS NEGAVFEAMN MASIMNLPCI FVAENNGYAE
ATASNWSVAC DHIADRAAGF GMPGVTIDGF DFFAVYEAAG AAIERARSGQ GPSLIEVKLS
RYYGHFEGDA QTYRAPDEVK NLRESRDCLM QFRNKTTRAG LLKAEQLDAI DARVEDLIED
AVRRAKSDPK PQPADLLTDV YVAYP
|
|---|
| |