| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0593 |
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| Symbol | |
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| ID | 5190914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 661771 |
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| End bp | 662793 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585045 |
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| Product | transketolase, central region |
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| Protein accession | YP_001265945 |
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| Protein GI | 148545843 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.90523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAA AGATCAGCTA CCAGCAGGCC ATCAACGAAG CCCTGGCCCA GGAAATGCGT
CGCGACAGCA CAGTGTTCAT CATTGGCGAA GACGTCGCCG GTGGCGCCGG TGCGCCCGGC
GAGGATGACG CCTGGGGTGG CGTGTTGGGC GTGACCAAAG GCCTGTATCA CCAATTCCCC
GGCCGCGTGC TTGACGCGCC GCTGTCGGAA ATCGGCTACG TCGGCGCGGC CGTCGGTGCC
GCCACCCAGG GCCTGCGCCC GGTGTGCGAA CTGATGTTCG TCGACTTCGC CGGCTGCTGC
CTGGACCAGA TCCTCAACCA GGCCGCCAAG TTCCGCTACA TGTTCGGCGG CAAGGCCGTG
ACCCCGCTGG TGATGCGCAC CATGTATGGC GCCGGCCTGC GTGCGGCAGC CCAGCACTCG
CAGATGCTCA CTTCGCTATG GACGCACATC CCCGGCCTGA AGGTGGTGTG CCCATCCTCG
CCTTACGATG CCAAGGGCCT GTTGATCCAG GCGATCCGCG ACAACGACCC GGTGATCTTC
TGCGAACACA AACTGCTGTA CAGCATGCAG GGCGAGGTGC CGGAAGAGGT GTACACCGTA
CCGTTCGGCG AAGCCAACTT CTTGCGCGAT GGCGACGACG TGACCCTCGT TACCTACGGG
CGCATGGTGC ATGTGGCGCT GGAGGCTGCC AACAACCTGG CCCGCCAGGG CATCGACTGC
GAGGTACTGG ACTTGCGCAC TACCAGCCCG CTGGACGAGG ACAGCATTCT GGAAAGTGTG
GAGAAGACTG GCCGCCTGGT GGTGATCGAT GAAGCCAACC CGCGCTGCTC GATGGCTACC
GACATCAGCG CGCTGGTGGC ACAGAAGGCT TTTGCCGCAC TCAAGGGGCC GATCGAAATG
GTCACCGCGC CACATACCCC GGTGCCGTTC TCCGACGCCC TGGAAGACCT GTACATCCCT
GACGCGGCGA AGATCGAAGC CGCCGTGCGC AAGGTGATCG AAGCCGCAAG GAGTGCCGCA
TGA
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| Protein sequence | MARKISYQQA INEALAQEMR RDSTVFIIGE DVAGGAGAPG EDDAWGGVLG VTKGLYHQFP
GRVLDAPLSE IGYVGAAVGA ATQGLRPVCE LMFVDFAGCC LDQILNQAAK FRYMFGGKAV
TPLVMRTMYG AGLRAAAQHS QMLTSLWTHI PGLKVVCPSS PYDAKGLLIQ AIRDNDPVIF
CEHKLLYSMQ GEVPEEVYTV PFGEANFLRD GDDVTLVTYG RMVHVALEAA NNLARQGIDC
EVLDLRTTSP LDEDSILESV EKTGRLVVID EANPRCSMAT DISALVAQKA FAALKGPIEM
VTAPHTPVPF SDALEDLYIP DAAKIEAAVR KVIEAARSAA
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