| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0589 |
|---|
| Symbol | |
|---|
| ID | 5194140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 656932 |
|---|
| End bp | 657576 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640585041 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265941 |
|---|
| Protein GI | 148545839 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTTGA CGCCTCAGCA TGTCCTGCTT GCCGGAGCCA CCGGCCTGAC CGGTGAACAC
CTGCTAGACC GCCTGCTCAA CGAGCCCACC ATCACCCGTG TCCTGGCGCC TACACGTCGG
CCATTGGCCG AGCACCCGCA CCTGGAAAAC CCGGTGGGCG ACCCGGCGGT ATTCCTTCCG
CAACTGGCCG GGCGGGTCGA CATCGCGTAC TGCTGCCTGG GCACCACGCT GAAGCAGGCG
GGTTCCGAAT CGGCTTTCCG CGCAGTGGAT CTGGACATGG TGGTCGCCTT CAGCAAGCGT
GCCCGAGAAA TGGGCGCACG GCATCTGCTG GTGGTGAGTG CAGTGGGCGC CGACCCTAAG
TCGTCAATTT TCTATAACCG GGTCAAGGGC GAGATGGAAG AAGCGCTCAA GGCTCAGGAC
TGGCCACAGT TGACCATCGT GCGGCCCTCG TTCCTGCTGG GCGAGCGGCT GGAGCCACGG
CTCACTGAAC AGCTTGTTGC GCCATTTTCC AGGTTGATCC CGGGGAAGTA TCGGGGAATC
GAGGCTTGTA CCCTGGCGCG AGCACTGTGG CGGCTGGCGC TGGAGGAAGA AGACGGCGTG
CGGGTTGTGG AGTCGGATGA GTTGCGCAGG TTGGGCAAGA TCTAG
|
|---|
| Protein sequence | MYLTPQHVLL AGATGLTGEH LLDRLLNEPT ITRVLAPTRR PLAEHPHLEN PVGDPAVFLP
QLAGRVDIAY CCLGTTLKQA GSESAFRAVD LDMVVAFSKR AREMGARHLL VVSAVGADPK
SSIFYNRVKG EMEEALKAQD WPQLTIVRPS FLLGERLEPR LTEQLVAPFS RLIPGKYRGI
EACTLARALW RLALEEEDGV RVVESDELRR LGKI
|
|---|
| |