| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0574 |
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| Symbol | |
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| ID | 5193563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 640191 |
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| End bp | 642050 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640585026 |
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| Product | CopA family copper resistance protein |
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| Protein accession | YP_001265926 |
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| Protein GI | 148545824 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.906058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGGC GCAACGGCAT GCAAAGCAAA ACCACCAGAC GCTCCTTCGT CAAAGGCCTG
GCTGCTACCG GAATACTCGG CGGGTTGGGC ATGTGGCGCA TGCCAGTGTG GGCGTTGACC
AGTCCTGGCC AGCCGAATGT GCTGACGGGC ACCGACTTTG ATCTCTACAT CGGTGAACTG
CCGGTGAATA TCACGGGTGC AAAACGGACA GCCATGGCAA TCAATGGTTC TGTACCTGGC
CCAACGCTTC GGTGGCGTGA AGGCGATATC GTTACGCTTC GTGTGCGCAA CCGCTTGAAA
CAGGACACCT CGATCCACTG GCACGGCATC ATCCTGCCGG CGAACATGGA CGGTGTCCCA
GGCCTGAGCT TCCATGGCAT CGCACCAGAT GGCATGTATG AGTACAAGTT CAAACTCCAT
CAAAACGGCA CCTACTGGTA CCACAGCCAC TCTGGCTTCC AGGAGCAAGT CGGGGTGTAT
GGCGCACTGG TCATCGACGC GAAAGAACCC GAGCCTTTCG CCTATGACCG GGATTACGTG
GTTATGCTCA GCGACTGGAC GGATGAGGAC CCTGCCCACG TTCTATCCAA GCTTAAGAAG
CAGTCTGACT ACTACAACTT CCACAAGCGG ACCGTGGGTG ACTTCGTCAA CGACGTAAGC
GAAATGGGCT GGTCTGCTGC GATGGCCGAT CGCAAGATGT GGGCCGAGAT GAAGATGAGC
CCCACTGATC TCGCGGATGT GAGCGGGTAT ACCTACACCT ACCTCATGAA CGGCCAGGCT
CCGGATGGAA ATTGGACGGG TGTTTTCAAG CCTGGCGAGA GAATCCGGCT TCGGTTCATC
AACGGCTCCG CCATGACGTA TTTCGATGTA CGCATTCCTG GCCTGAAAAT GACAGTGGTT
GCAGCGGATG GGCAGTATGT CCATCCGGTC TCGGTCGACG AGTTCCGTAT CGCAGTAGCC
GAAACCTACG ATGTCATTGT TGAGCCAGAA GACGAACAGG CATACACCAT CTTCGCTCAA
TCCATGGACC GTACGGGCTT TTCCAGGGGC ACCCTGGCCA TCCGTGAAGG CTTGCAAGCT
GCTGTTCCAA CCGTTGACCC ACGCCCCCTC ATTTCCATGA ATGATATGGG CATGGACCAC
AGCAGCATGG CTGGCATGGA CCACAGCAGC ATGGCCGGCA TGGATCACAG CAAGATGGCT
GGCATGGACC ACGGCAGCAT GGCCGGCATG GATCACAGCA AGATGGCTGG CACGGACCAC
GGCAGCATGG CCGGCATGGA TCACAGCAAG ATGGCTGGCA TGGACCACGG CAGCATGGCC
GGCATGAGTA AGGAAATGCA GAGTCATCCA GACTCAGAGC TCAACAACCC ATTGGTCGAC
ATGCAGACGA TGACCCCGAC GGCAAAATTG GATGACCCGG GCATCGGGCT ACGTAACAAC
GGCCGCCGCG TCCTGACCTA TGCAGACCTG CGGAGCACCT TCATCGACCC AGATGGACGA
GAGCCTAGCC GGAATATCGA GCTGCACCTG ACGGGTCACA TGGAGAAATT CGCCTGGTCC
TTCGACGGCA TCAAGTTTTC CGATGCCGCC CCCCTGCGCC TCAAGTACGG AGAGCGCCTT
CGTATCACCT TGATTAACGA CACCATGATG ACTCACCCCA TCCACCTTCA TGGCATGTGG
AGCGACCTGG AGGATGAGAA CGGCAACTTC ATGGTTCGAA AACACACCAT CGACATGCCA
CCAGGCTCAA AACGAAGCTA TCGCGTAACT GCGGATGCTT TGGGGCGTTG GGCCTATCAC
TGTCACCTCA TGTTCCATAT GGAAACGGGC ATGTTCCGAG AAGTCCGTGT GGACGAATGA
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| Protein sequence | MSGRNGMQSK TTRRSFVKGL AATGILGGLG MWRMPVWALT SPGQPNVLTG TDFDLYIGEL
PVNITGAKRT AMAINGSVPG PTLRWREGDI VTLRVRNRLK QDTSIHWHGI ILPANMDGVP
GLSFHGIAPD GMYEYKFKLH QNGTYWYHSH SGFQEQVGVY GALVIDAKEP EPFAYDRDYV
VMLSDWTDED PAHVLSKLKK QSDYYNFHKR TVGDFVNDVS EMGWSAAMAD RKMWAEMKMS
PTDLADVSGY TYTYLMNGQA PDGNWTGVFK PGERIRLRFI NGSAMTYFDV RIPGLKMTVV
AADGQYVHPV SVDEFRIAVA ETYDVIVEPE DEQAYTIFAQ SMDRTGFSRG TLAIREGLQA
AVPTVDPRPL ISMNDMGMDH SSMAGMDHSS MAGMDHSKMA GMDHGSMAGM DHSKMAGTDH
GSMAGMDHSK MAGMDHGSMA GMSKEMQSHP DSELNNPLVD MQTMTPTAKL DDPGIGLRNN
GRRVLTYADL RSTFIDPDGR EPSRNIELHL TGHMEKFAWS FDGIKFSDAA PLRLKYGERL
RITLINDTMM THPIHLHGMW SDLEDENGNF MVRKHTIDMP PGSKRSYRVT ADALGRWAYH
CHLMFHMETG MFREVRVDE
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