Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0572 |
Symbol | |
ID | 5193525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 638151 |
End bp | 638924 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640585024 |
Product | hypothetical protein |
Protein accession | YP_001265924 |
Protein GI | 148545822 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.940796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAGAA CAATTACAAC GCTCGTAGTA GCGGGTGCCG CGGCCAGTGC AGGGGTATTG GGTGCAGCTT ACCTTGGCCT GGTCAACGTC GGCGCTGACG ATCCGCATTT CCCTGCAGTG CATGCATTTC TGGTCATGGC GCGGGATCGC TCCATTGAGG TACGCGCAAG AAACATCGAG GTACCGAACC TCAAGGATGA AAACCTGATT CGTGTCGGCG CCGGCAACTA CAACGCCATG TGCATCGGTT GCCATCTTGC CCCTGGCGTC GAGAAAACAG AGCTCAGCCA GGCGCTTTAT CCGTCTCCTC CCAACCTTGG CAAGCTTGGG ATCGGTGGTA AACCCGCCGT AGCATTCTGG ACCATCAAGC ACGGCATCAA AGCCTCTGGC ATGCCTGCCT GGGGCAAGAG CATGGGCGAT GAGTACATCT GGGGACTCGT TGCATTTCTG GATCAACTAC CCCAGATGAA CGCCCAACAG TACAACGCGA TGGTAGCGAT CAGTGGCGGT CACCAGCATG GTGGAGGTGA AAGTGAAATG CACAGCCATG AAGGCCAACA CGGCGACAAC GTGCCCAATC ACCCTGCAGA GGCAGTCTCG GGGAGAGATC ATCATGACAG GGGACATGCA CAGGCACACC ATCCCAAATC ACCATCACCA GAGCCCGCAC CTGAACACCA CGGCCATGAC GAAACCGGCA GTGATCACCA CTCAAAGCCG GCTCAGAAGA AGCCTATTCA CCGTGATGGT GCGGAACATA CCCATGAAGG CTGA
|
Protein sequence | MKRTITTLVV AGAAASAGVL GAAYLGLVNV GADDPHFPAV HAFLVMARDR SIEVRARNIE VPNLKDENLI RVGAGNYNAM CIGCHLAPGV EKTELSQALY PSPPNLGKLG IGGKPAVAFW TIKHGIKASG MPAWGKSMGD EYIWGLVAFL DQLPQMNAQQ YNAMVAISGG HQHGGGESEM HSHEGQHGDN VPNHPAEAVS GRDHHDRGHA QAHHPKSPSP EPAPEHHGHD ETGSDHHSKP AQKKPIHRDG AEHTHEG
|
| |