| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0562 |
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| Symbol | |
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| ID | 5192260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 628245 |
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| End bp | 629132 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585014 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001265914 |
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| Protein GI | 148545812 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.109586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGCA CCTACCAGGC CAGTTGCCAG GCTCGAGTCG ACGCAGCCCT CGAACCGCTG
TTCATCGCCC CGAGCAAAGA GCTGCAACGC CTCTACGCCG CCATGCGCTA CAGCGTGATG
AACGGCGGCA AACGCGTGCG CCCGCTGTTG GCCTATGCGG CCTGCGAAGC CTTGGGCGCC
CCGGCCGAAC AGGCCAACGG CGCAGCCTGC GCGGTAGAGC TGATCCATGC TTACTCGCTG
GTGCATGACG ACCTCCCGGC CATGGACGAC GACGACCTGC GTCGCGGCCA GCCGACCACC
CACAAGGCGT TTGACGAAGC GTGCGCAATC CTCGCGGGCG ACGGTTTGCA GAGCCTGGCT
TTCAGTGCCC TGCTCGACCC ATGCCTGAGC CCTCAGATCG ACAGCATTCG TCTGGCCATG
GTTCAGGTAC TGGCCAAAGC TGCCGGCCCG GCCGGCATGG TTGGCGGCCA GGCGATCGAT
CTCGGTTCGG TGGGCCAGAA GCTGGATCAG CAGGCGCTGG AGTTCATGCA CCGGCACAAG
ACCGGCGCGC TGATCGAAGC CAGCGTACGC CTCGGCGCCC TGGCCAGTGC CCGTGCCGAA
CAGGCGCAGC TGGATGCCCT GCAGACTTAT GCACAGGCCA TTGGCCTTGC ATTCCAGGTG
CAGGACGACA TCCTCGACGT GGAAAGCGAC ACTGCTACCT TGGGCAAACG CCAAGGTGCA
GACATAGCGC GTGACAAACC GACGTACCCG GCCCTGCTGG GCCTGGAAGC CGCCAAAGTC
TATGCAATCG AACTGCGCGA CCAGGCGCTG GCTGCACTGC AAGGATTCGG CGAAACGGCC
GAACCGCTGC GGGCACTGGC GCGTTACATC GTCGAACGCC GTAACTAA
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| Protein sequence | MIGTYQASCQ ARVDAALEPL FIAPSKELQR LYAAMRYSVM NGGKRVRPLL AYAACEALGA
PAEQANGAAC AVELIHAYSL VHDDLPAMDD DDLRRGQPTT HKAFDEACAI LAGDGLQSLA
FSALLDPCLS PQIDSIRLAM VQVLAKAAGP AGMVGGQAID LGSVGQKLDQ QALEFMHRHK
TGALIEASVR LGALASARAE QAQLDALQTY AQAIGLAFQV QDDILDVESD TATLGKRQGA
DIARDKPTYP ALLGLEAAKV YAIELRDQAL AALQGFGETA EPLRALARYI VERRN
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