Gene Pput_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0551 
Symbol 
ID5190872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp617545 
End bp618636 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content64% 
IMG OID640585003 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 
Protein accessionYP_001265903 
Protein GI148545801 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTCA ACAGCATCGA AGAACTGGTC GAAGACATCC GCCAGGGCAA AATGGTCATC 
CTGATGGATG ACGAAGACCG CGAGAACGAA GGCGACATTA TCATGGCGGC CGAATGCTGC
CAGCCGGAGC ACATCAACTT CATGGCCAAG CATGCCCGTG GCCTGATCTG CATGCCGATG
ACCCGCGAGC GTTGTGAAAC GCTGAAGCTG CCGTTGATGG CGCCGCGCAA CGGCTCGGGC
TTCGGCACCA AGTTCACCGT GTCGATCGAG GCCGCCGAAG GCGTCACCAC CGGTATTTCC
GCCGCCGACC GCGCCCGCAC TGTGCAGGCT GCCGCTGCCA AGGACGCCAA GGCCGAAGAC
ATCGTCAGCC CTGGTCACAT CTTCCCGCTG ATGGCCCAGC CAGGCGGTAC GCTGGCGCGT
GCCGGCCACA CCGAAGCCGC CTGTGACCTG GCGCGCATGG CCGGTTTCGA GCCAAGCGGC
GTGATCTGCG AAGTGATGAA CGACGACGGC ACCATGTCGC GCCGCGCCGA ACTGGAAGTG
TTCGCCGCCG AGCACGGCCT GAAGATCGGC ACCATTGCCG ACCTGATCCA CTACCGCATG
ATCCACGAGC GCACCGTGCA GCGTGTTTCC GAGCAATCGG TGGAGAGCGA GCTGGGTGAG
TTCAACCTGG TCACCTACCG TGACGCGGTC GAAGGCGACG TGCACATGGC CTTGACCCTG
GGCAAGATCT GCGCCGAAGA GCCGACCTTG GTACGGGTAC ACAATATGGA CCCACTGCGT
GACCTGCTGC TGGTCAAGCA GCCAGGCCGC TGGAGCCTGC GCGCGGCCAT GGCCGCAGTG
GCCGAAGCCG GCAGTGGCGT GGTGCTGCTG CTGGGGCACC CGCTGGACGG CGACGTGCTG
CTGGCGCACA TCCGCGAAAG CGCGGGCGAT GCACCGGCCA AGGCACCGAC TACCTACAGC
ACCGTGGGGG CCGGTTCGCA GATCCTGCGC GACCTCGGTG TGCGCAAGAT GCGCCTGATG
AGTTCGCCGA TGAAGTTCAA CGCGATATCC GGATTCGATC TGGAAGTTGT AGAATACGTG
CCCTCCGAGT GA
 
Protein sequence
MALNSIEELV EDIRQGKMVI LMDDEDRENE GDIIMAAECC QPEHINFMAK HARGLICMPM 
TRERCETLKL PLMAPRNGSG FGTKFTVSIE AAEGVTTGIS AADRARTVQA AAAKDAKAED
IVSPGHIFPL MAQPGGTLAR AGHTEAACDL ARMAGFEPSG VICEVMNDDG TMSRRAELEV
FAAEHGLKIG TIADLIHYRM IHERTVQRVS EQSVESELGE FNLVTYRDAV EGDVHMALTL
GKICAEEPTL VRVHNMDPLR DLLLVKQPGR WSLRAAMAAV AEAGSGVVLL LGHPLDGDVL
LAHIRESAGD APAKAPTTYS TVGAGSQILR DLGVRKMRLM SSPMKFNAIS GFDLEVVEYV
PSE