| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0548 |
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| Symbol | nrdR |
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| ID | 5190180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 615221 |
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| End bp | 615685 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585000 |
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| Product | transcriptional regulator NrdR |
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| Protein accession | YP_001265900 |
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| Protein GI | 148545798 |
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| COG category | [K] Transcription |
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| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
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| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTGTC CCTTTTGCGG TGCCAACGAC ACCAAGGTCA TCGACTCTCG CCTCGTCGCC
GAGGGCGAGC AGGTGCGCCG CCGCCGTGAA TGCGTGGCCT GCGGCGAGCG CTTCACCACC
TTCGAAACCG CCGAGCTGGT GCTGCCCCGG CTGATCAAGC AGGACGGCAC GCGTCAGCCC
TTCGACGAAG AAAAACTGCG CGCTGGTATG CAACGGGCCC TGGAAAAGCG TCCGGTCAGC
GTCGAGCGCC TGGAAGCTGC GCTGGCGCAC ATCAAGAGCC GGCTGCGTGC CACAGGCGAG
CGCGAAGTCA AATCGTTGGT GGTCGGTGAA ATGGTCATGG CCGAGTTGCG CAAACTCGAT
GAAGTGGCCT ATATCCGCTT TGCTTCGGTG TACCGGCGCT TCCAGGACCT CGACGAGTTC
CGCGAAGAAA TCGACCGCCT GGCCCGTGAG CCAGCTAAAG AGTGA
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| Protein sequence | MHCPFCGAND TKVIDSRLVA EGEQVRRRRE CVACGERFTT FETAELVLPR LIKQDGTRQP
FDEEKLRAGM QRALEKRPVS VERLEAALAH IKSRLRATGE REVKSLVVGE MVMAELRKLD
EVAYIRFASV YRRFQDLDEF REEIDRLARE PAKE
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