Gene Pput_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0543 
Symbol 
ID5193306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp611899 
End bp612480 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID640584995 
Producthypothetical protein 
Protein accessionYP_001265895 
Protein GI148545793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.902845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCC TGCTGCTCGC CCTGCCCTTC GCTTTGCTGC CACTGGCCGT GGCCCATGCT 
CACGATGACC ATGACCATGA TCATGACCAT GCCCACGGCT CCCTCGGCGC CCACGAGCAT
GGCGTAGCCA AGCTAAACGC AGTGCTCGAT GGCAATACCT TGGAACTGGA ACTGGACAGC
CCGGCAATGA ACCTGGTCGG CTTCGAGCAT GCCGCCAGCA GCGATGCCGA CATGGCCAAA
GTCGCCGCCG TGCGCCAGCA ACTTGAACAA CCACTAAAGC TGTTCGGCCT TTCCGCCGCC
GCAGGCTGCA AGGAAGACCA GCAGGCACTG GAAAGCCCTC TCTTCGGTGA CGCCTCCAAG
GCCGACGACG AGGGTGACGA GCACGAGCAC GGCCATCAGC ACAGCGACAT CGGCGCCCAT
TATCAGCTGA CTTGCGCCAA CCCCGACAAA CTGACAGAGC TGGACCTGGC GCCGCTGTTC
AAGGCCTTCC CCGCCACCCA GAAAATCAAC GTGCAACTGA TCGGCCCCAA TGGCCAGAAA
GGCGTGGAAA CCACGCCGGC CAAGGCAACG GTCGCCTTCT GA
 
Protein sequence
MRRLLLALPF ALLPLAVAHA HDDHDHDHDH AHGSLGAHEH GVAKLNAVLD GNTLELELDS 
PAMNLVGFEH AASSDADMAK VAAVRQQLEQ PLKLFGLSAA AGCKEDQQAL ESPLFGDASK
ADDEGDEHEH GHQHSDIGAH YQLTCANPDK LTELDLAPLF KAFPATQKIN VQLIGPNGQK
GVETTPAKAT VAF