Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0543 |
Symbol | |
ID | 5193306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 611899 |
End bp | 612480 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584995 |
Product | hypothetical protein |
Protein accession | YP_001265895 |
Protein GI | 148545793 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.902845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCC TGCTGCTCGC CCTGCCCTTC GCTTTGCTGC CACTGGCCGT GGCCCATGCT CACGATGACC ATGACCATGA TCATGACCAT GCCCACGGCT CCCTCGGCGC CCACGAGCAT GGCGTAGCCA AGCTAAACGC AGTGCTCGAT GGCAATACCT TGGAACTGGA ACTGGACAGC CCGGCAATGA ACCTGGTCGG CTTCGAGCAT GCCGCCAGCA GCGATGCCGA CATGGCCAAA GTCGCCGCCG TGCGCCAGCA ACTTGAACAA CCACTAAAGC TGTTCGGCCT TTCCGCCGCC GCAGGCTGCA AGGAAGACCA GCAGGCACTG GAAAGCCCTC TCTTCGGTGA CGCCTCCAAG GCCGACGACG AGGGTGACGA GCACGAGCAC GGCCATCAGC ACAGCGACAT CGGCGCCCAT TATCAGCTGA CTTGCGCCAA CCCCGACAAA CTGACAGAGC TGGACCTGGC GCCGCTGTTC AAGGCCTTCC CCGCCACCCA GAAAATCAAC GTGCAACTGA TCGGCCCCAA TGGCCAGAAA GGCGTGGAAA CCACGCCGGC CAAGGCAACG GTCGCCTTCT GA
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Protein sequence | MRRLLLALPF ALLPLAVAHA HDDHDHDHDH AHGSLGAHEH GVAKLNAVLD GNTLELELDS PAMNLVGFEH AASSDADMAK VAAVRQQLEQ PLKLFGLSAA AGCKEDQQAL ESPLFGDASK ADDEGDEHEH GHQHSDIGAH YQLTCANPDK LTELDLAPLF KAFPATQKIN VQLIGPNGQK GVETTPAKAT VAF
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