| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0541 |
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| Symbol | |
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| ID | 5195474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 609923 |
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| End bp | 611188 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584993 |
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| Product | hypothetical protein |
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| Protein accession | YP_001265893 |
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| Protein GI | 148545791 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTGC TCCGCCTTGC CTTGGCCAGC CTGGCCAACC GCCGCTTCAC GGCGTTTCTG
ACCGCCTTTG CCATTGCCCT GTCGGTGTGC CTGCTGCTGG CTGTTGAGCG GGTCCGTACC
GAAGCCCGTG CCAGCTTCGC CAGCACCATC AGCGGCACCG ACCTGATTGT CGGTGCACGC
TCCGGCTCGG TGAACCTGCT GCTGTACTCG GTGTTCCGCA TTGGCAACGC GACCAACAAC
ATCCGCTGGG ACAGCTTCCA GCACTATGCA CAGGACCCAC GGGTGAAGTG GGCAATCCCG
ATCTCGCTGG GCGACTCGCA CCGCGGTTAC AGAGTGATGG GTACCACCAC GGATTACTTC
AGCCATTACC AGTACGGCCG CCGCCAGCAC CTGGAACTGA GCCAGGGGCG TACGTTCGCC
AACGACCCGT TCGAAGTGGT GCTCGGCGCC GAAGTGGCCG AGGCATTGCA CTACAAGCTG
GGTGACAAGC TGGTGCTGGC CCACGGTGTG GCCGCAATCA GCCTGGTCAA GCACGACGAC
AAGCCGTTTA CCGTGGTCGG CGTACTCAAG CGCACCGGCA CACCCGTCGA CCGCACCCTG
CATATCAGCC TGGGCGGCAT GGAAGCGATC CATATCGACT GGCACAACGG CGTACCCGCC
CGTGGCGCCG GCCGCATCAG CGCCGAGCAG GCCCGTACCA TGGACCTGCA ACCAGCCGCC
ATCACTGCGT TCATGCTTGG CCTTAACAGC AAGATCGCAA CCTTCAGTTT GCAGCGAGAG
ATCAACGAGT ACCGCAGCGA GCCGTTGCTG GCGATCCTGC CAGGGGTCGC CCTGCAGGAG
CTGTGGAGCC TGATGGGCAC TGCAGAACAG GCATTGTTCG TGGTGTCACT GTTCGTGGTG
CTGACCGGTT TGATCGGCAT GCTCACGGCG ATTCTCACCA GCCTCAACGA ACGCCGCCGA
GAGATGGCGA TACTGCGTTC GGTCGGGGCC CGGCCTTGGC ATATTGCGGG GTTGCTGGTA
CTGGAAGCCC TGTCACTGGC CTCGGTCGGG ATCGTGGCCG GGCTTGGCTT GCTATATGCG
GGTATCGCCC TGGCGCAGGG GTATGTGCAG GCCAACTATG GTTTGTACTT GCCACTGGCT
ATGCCGAGTA CCCATGAATG GACCTTGCTG GCTATCATCC TGGGGGCCGC GTTGCTGATG
GGCAGCGTGC CGGCGTGGCG GGCTTACCGG CAATCGCTGG CCGACGGCCT GTCCATACAC
CTCTGA
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| Protein sequence | MYLLRLALAS LANRRFTAFL TAFAIALSVC LLLAVERVRT EARASFASTI SGTDLIVGAR
SGSVNLLLYS VFRIGNATNN IRWDSFQHYA QDPRVKWAIP ISLGDSHRGY RVMGTTTDYF
SHYQYGRRQH LELSQGRTFA NDPFEVVLGA EVAEALHYKL GDKLVLAHGV AAISLVKHDD
KPFTVVGVLK RTGTPVDRTL HISLGGMEAI HIDWHNGVPA RGAGRISAEQ ARTMDLQPAA
ITAFMLGLNS KIATFSLQRE INEYRSEPLL AILPGVALQE LWSLMGTAEQ ALFVVSLFVV
LTGLIGMLTA ILTSLNERRR EMAILRSVGA RPWHIAGLLV LEALSLASVG IVAGLGLLYA
GIALAQGYVQ ANYGLYLPLA MPSTHEWTLL AIILGAALLM GSVPAWRAYR QSLADGLSIH
L
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