Gene Pput_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0537 
Symbol 
ID5192938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp606751 
End bp607194 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID640584989 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001265889 
Protein GI148545787 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATG AAAACAATGC GCAGTGCCCC GTGGCCCGGG CTCTGGAGGT GCTGGGTGAC 
CGTTGGGCGC TGATGATCCT GCGCGATGCC TTTGACGGCC TACGGCGTTT CAGTGAATTT
CAGAAGAACC TGGGGCTGGC GAAGAACATC CTCACCTCGC GGCTAAAGCT GTTGGTGGAA
AGCGGGTTGC TGATGACACA GCCGGCGTCG GATGGCAGTG CCTATAAAGA ATATGTGCTG
ACCGACAAAG GGCGGTCGGT GTTTCCAGTG GTGGTTGGTT TGAGGCAGTG GGGGGAGCGG
TTTCTGTTCG AGGCGGGTGA AACGCGTTCG GAGCTGGTGG ACGGCGTGAC GGGGCAGGCG
CTTGAAATAT TGCAGGTCCG TGGCCAGGAT GGGCGGGTCT TACATCCCGA AGATTGCCAG
CGCAGAAGGG TGCGGCATGG GTGA
 
Protein sequence
MLDENNAQCP VARALEVLGD RWALMILRDA FDGLRRFSEF QKNLGLAKNI LTSRLKLLVE 
SGLLMTQPAS DGSAYKEYVL TDKGRSVFPV VVGLRQWGER FLFEAGETRS ELVDGVTGQA
LEILQVRGQD GRVLHPEDCQ RRRVRHG