Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0536 |
Symbol | |
ID | 5192937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 605788 |
End bp | 606720 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640584988 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001265888 |
Protein GI | 148545786 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACG CCCCCATCCT GATCACCGGC GGTGCCGGCT TCATTGGCTC CCACCTGTGC GATGCGTTGT TGGACAAAGG CTACGCCGTA CGCATTCTCG ACGACTTCTC CACCGGCCGG CGAAGCAATC TGCAGGTCGA CCACCCACGG CTGGAACTGA TCGAAGGTGA TGTTGCCGAT GCAGGGCTGG TCACTCAGGC TGCGGCTGGC TGCCGTGCTG TGGTGCATCT GGCGGCGGTA GCGTCGGTTC AGGCCTCGGT CGAAGACCCG GTGCGTACCC ACCAGAGTAA CTTCATCGGT ACCCTCAACG TTTGCGAAGC CATGCGCGTG CATGGCGTGC GCCGGGTGCT CTTCGCCTCC AGCGCAGCGG TGTACGGCAA CAATGGTGAA GGGGAGTCGA TTTCCGAAGA CACGCCCAAG GCGCCGTTGA CCCCTTATGC CGTGGACAAG CTGGCCAGTG AGCAGTACCT GGACTTCTAC CGTCGCCAGC ATGGTCTGGA GCCGGTGGTG TTTCGCTTCT TCAATATCTT CGGGCCACGG CAGGACCCTT CCTCACCGTA TTCCGGGGTG ATCAGCATCT TCTGCGAGCG CGTTGTGCAG GGCTTGCCGA TTACAGTGTT CGGTGACGGC GAGCAGACCC GTGACTTCCT TTACGTGGGC GACCTGGTGC AGGTGATGGT GCAGGCACTG GAGCAGCCGC AGGTTGAGGA GGGGGCGGTG AACATCGGGC TGAACCAGGC GACCTCACTG AACCAGTTGC TGGCTGCGCT GGAGAAGGTT GTAGGGAGCT TGCCAGCGAT CAGCTATGCG GCGGCGCGAT CGGGTGATAT CCGCCATTCG CGAGCGGATA ACCAGCGGTT GTTGGCGCGG TTCAAATTTG CGCAGGTAAC GCCGATGGTT GAAGGCCTGA CAAAGCTTCT CGGTAAAGGC TGA
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Protein sequence | MADAPILITG GAGFIGSHLC DALLDKGYAV RILDDFSTGR RSNLQVDHPR LELIEGDVAD AGLVTQAAAG CRAVVHLAAV ASVQASVEDP VRTHQSNFIG TLNVCEAMRV HGVRRVLFAS SAAVYGNNGE GESISEDTPK APLTPYAVDK LASEQYLDFY RRQHGLEPVV FRFFNIFGPR QDPSSPYSGV ISIFCERVVQ GLPITVFGDG EQTRDFLYVG DLVQVMVQAL EQPQVEEGAV NIGLNQATSL NQLLAALEKV VGSLPAISYA AARSGDIRHS RADNQRLLAR FKFAQVTPMV EGLTKLLGKG
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