| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0527 |
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| Symbol | |
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| ID | 5193331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 595797 |
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| End bp | 597224 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640584981 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_001265881 |
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| Protein GI | 148545779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.817809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACA GCCTAGCCAG CGACACCCCA CGCCTGCCGT CCATCGATAC TCTCCTTCGC
CACCCGGCTT GCCTCCCACT GATCGATCGC CACGGCCGCG ACGCCGTGCT GAATACCCTG
CGCCAGCTGC TCGACGACCT GCGCGAACCC GCCCGTAATG GCGAACTCGG CAGCGCCGAA
CTGGCTCCGG AAATCCTCCT TGGCCGCAGC GGCGAACGCC TCGCCCTCCA GCAACGCAGC
CAGGTTCGCC GCGTGTTCAA TCTCACCGGG ACCGTGCTGC ACACCAACCT GGGCCGCGCC
TTGCTACCGG AAGAAGCCAT CGAGGCCATG CAGACCGCGG CTCGTTACCC GCTCAACCTG
GAATTCGACC TGGCCACCGG CAAACGTGGC GACCGTGATG ACCTGATCGA AGGCCTGATC
CGCGAGCTGA CCGGCGCCGA AGCCGTCACT GTGGTCAACA ACAATGCCGC CGCCGTGCTG
CTAGCGCTCA ACAGCCTGGG CGCGCGCAAG GAAGGCATCA TCTCTCGCGG TGAACTGATC
GAGATCGGTG GTGCCTTCCG CATTCCCGAC ATCATGGCCC GTGCCGGTGT GAAGCTGCAC
GAGGTTGGCA CCACCAACCG TACTCACGCC CGCGACTACG AGGCCGCCAT CGGCCCGCGC
ACTGGCCTGC TGATGCGGGT GCATTGCAGC AATTACAGCA TCCAGGGCTT CACTACCCAG
GTGCCTACTG CCGAGCTGGC ACGTATCGCC CACCAACATC AACTGCCACT GCTTGAAGAC
CTGGGCAGCG GCAGCCTGCT CGACCTTACC CGCTGGGGCC TGCCCGCTGA ACCCACGGTA
CGCCAGGCCC TGGCCGATGG TGCCGATATC GTCACCTTCA GTGGCGACAA ACTGCTGGGG
GGGCCGCAAG CCGGGATCAT CGTCGGCCAC AAGGACTTGA TCACCAGGAT CAAGAAAAAT
CCGCTCAAGC GTGCGTTGCG CGTCGACAAG ATCACCCTCG CTGCACTCGA AGCGGTGCTG
GCGCTGTACC GTAACCCCGA TCGCCTGGCC GAGCGCCTGC CCAGCCTGCG CTTGCTGACT
CGCAGCCAGG CCGAGATTCA GGCCCAGGCC GAGCGCCTGG CGCCTGAGCT CCAGGCGCGC
CTCGGCGAGC AATGGGCCAT CCGTGTAGAG CCCGCGTTGG GCATGATCGG CAGTGGCAGC
CAGCCGGTTG CACGCTTGCC CAGTGCCGCG CTGTGCCTGC GCCCGCAAGT GTCGAAGAAG
TTGCGCGGGC GCAGCCTGCA TGTGCTGGAG CGAGCCCTGC GTGACCTACC GGTGCCGGTG
CTGGGCCGCA TTGATGACGA TGCCCTGTGG CTGGACCTGC GCCAGCTGGA TGACGAAGCC
CAGTGGCTGG CCCAGTTGCC AGCCCTGCAG CTGGGGCCGG TGCAGTGA
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| Protein sequence | MSNSLASDTP RLPSIDTLLR HPACLPLIDR HGRDAVLNTL RQLLDDLREP ARNGELGSAE
LAPEILLGRS GERLALQQRS QVRRVFNLTG TVLHTNLGRA LLPEEAIEAM QTAARYPLNL
EFDLATGKRG DRDDLIEGLI RELTGAEAVT VVNNNAAAVL LALNSLGARK EGIISRGELI
EIGGAFRIPD IMARAGVKLH EVGTTNRTHA RDYEAAIGPR TGLLMRVHCS NYSIQGFTTQ
VPTAELARIA HQHQLPLLED LGSGSLLDLT RWGLPAEPTV RQALADGADI VTFSGDKLLG
GPQAGIIVGH KDLITRIKKN PLKRALRVDK ITLAALEAVL ALYRNPDRLA ERLPSLRLLT
RSQAEIQAQA ERLAPELQAR LGEQWAIRVE PALGMIGSGS QPVARLPSAA LCLRPQVSKK
LRGRSLHVLE RALRDLPVPV LGRIDDDALW LDLRQLDDEA QWLAQLPALQ LGPVQ
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