| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0523 |
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| Symbol | |
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| ID | 5193283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 590658 |
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| End bp | 593123 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640584977 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001265877 |
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| Protein GI | 148545775 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAGTC TTGCCCCGAC GTACGGCCGT GGCGCCATGA CCAACCACTG GTCCGATATC
GCCAACGCGA ATCTGGTCCT GGTGATGGGT GGCAACGCAG CAGAAGCGCA TCCGTGCGGC
TTCAAGTGGG TGACCGAGGC CAAAGCGCAC AACAAGGCGC GGCTTATTGT GGTCGACCCG
CGGTTTACCC GTACCGCTTC GGTGGCGGAC TACTACGCGC CGATCCGGAC CGGCACCGAT
ATCGCCTTCA TGGGCGGGCT GATCAACTAC CTGCTCAGCA ACGACAAGAT CCAGCACGAG
TACGTGCGCA ACTACACTGA CGTGTCGTTC ATCGTCAAAG AGAACTATGG CTTCGAGGAT
GGCCTGTTCA GCGGCTACGA CGAGGCCAAG CGTGTGTACG CCGACAAGTC CGGCTGGGGT
TACGAGCTGG GTGAGGACGG CTATGCCAAG GTCGACCCGA CACTGCAGCA TCCTCGCTGC
GTGTTCCAGC TGATGAAGCA GCATTACAGC CGCTATACCC CGGAACTGGC GAGCATGACC
TGTGGCATGC CACAGGACGC CATGATGAAG GTCTGGGAAG AGATCGCCTC CTGCTCGGTT
CCGGGCAAGA CCATGACGAT CCTTTATGCG CTAGGTTGGA CGCAGCATTC GATCGGTGCG
CAGATTATCC GCAGTGCGGC CATGGTCCAG CTGCTGCTCG GCAACGTCGG CATGCCCGGT
GGCGGGGTCA ATGCCCTGCG CGGGCACTCC AACATCCAGG GCCTGACCGA CCTCGGCCTG
CTGTCCAATT CGCTGCCGGG CTACCTGACC CTGGCCGGTG ACGCCGAGCA GGACTACGCC
GCCTACATCG ACAAGCGCGC TTCCAAGCCG CTGCGGCCTG GGCAGTTGTC GTACTGGCAG
AACTACGGCA AGTTCCACGT CAGCCTGATG AAGGCCTGGT ACGGCGCCAA TGCCACGGCG
GAAAACAACT GGGGTTATGA CTGGCTGCCC AAACTCGATG TACCGGCCTA CGACGTGCTG
CGCATGTTCG AGATGATGGG CCAGGGCAAA GTCAACGGTT ATATGTGCCA GGGCTTCAAC
CCGATCGCCG CGCTGCCGGA CAAAAACCGC GTCACTGCGG CACTGGGCAA GCTCAAGTGG
CTGGTGATCA TGGACCCCTT GGCCACCGAG ACCTCGGAAT TCTGGCGTAA CGTCGGGCCG
TTCAACGATG TCGACACGGC CTCTATCCAG ACCGAAGTGA TCCGCTTGCC CACTACCTGC
TTCGCCGAGG AAGACGGCTC GCTGGTCAAC AGCAGCCGCT GGCTGCAATG GCACTGGAAG
GGCGCAGACG GCCCGGGCGA GACGCGCACC GACGTGCAGA TCATGAGCGA GCTGTTCCTG
CGCCTGCGCC AACGTTACCA GGCCGAAGGG GGCGCCTACC CTGACGCGAT AATGAATATC
AGCTGGCCGT ACAAGATCCC TGAAGAGCCC TCCCCGGAGG AGCTGGCCAA GGAGATGAAC
GGCTGGGCGG TGGCCGATGT CACCGACCCG ACTGGCGCGG TGATCAAGGC GGGCCAGCAA
CTGGCGGGCT TCGGTCAGCT CAAGGACGAC GGTAGCACCG CGTCTGGCTG CTGGATCTTT
GCCGGTAGCT GGACCGAACA GGGCAACCAG ATGGCTCGCC GCGACAACAG CGACCCGTAT
GGCATGCACC AGGTGCAGAA CTGGGCCTGG GCCTGGCCGG CCAACCGCCG CATCCTTTAC
AACCGTGCCT CCAGCGACCC GCAAGGCAAG CCGTGGGACC CGGAGAAAAA GCGCCTGGTA
TGGTGGAACG GCAAGGCCTG GACCGGCACC GACGTGCCGG ACTTCAAGGT CGACTCGCCG
CCCGAGGCGG GGATGAACCC CTTCATCATG AACCCCGAAG GCGTGGCGCG TTTCTTCGCC
ATCGACAAAA TGGCCGAAGG CCCGTTCCCC GAGCACTATG AGCCCTTCGA AACACCGATC
GGCATCAACC CGCTGCACCC GCAGAACAAG AAGGCCACCA GCAACCCGGC CGGGCGCATC
TTCGATTCTG TGTGGGACAC CCTCGGCACG CACGATGAGT TCCCTTATGC GGCGACCACC
TACCGGCTAA CCGAGCATTT CCACTTCTGG AGCAAGCATT GCCGGCTCAA CGCCATTGCC
CAGCCCGAGC AGTTCGTCGA GATAGGCGAG GTGCTGGCCA ACGAGAAAGG CATCAAGGCC
GGCGACCGGG TACGGGTGTC GAGCAAGCGT GGGCATATCG ATGCGGTGGC GGTGGTGACC
AAGCGGATTC GCCCGCTGCA GGTCAATAAT CAGACCGTGC ACCAAATCGG CATTCCGCTG
CACTGGGGCT TCACCGGCGC TACCCGGCAT GGCTACCTGA CCAATACCTT GGTGCCGTTC
CTCGGTGACG GCAATACGCA GACGCCAGAG TCCAAGTCGT TCCTCGTGAA AGTGGAGAAA
CTCTGA
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| Protein sequence | MASLAPTYGR GAMTNHWSDI ANANLVLVMG GNAAEAHPCG FKWVTEAKAH NKARLIVVDP
RFTRTASVAD YYAPIRTGTD IAFMGGLINY LLSNDKIQHE YVRNYTDVSF IVKENYGFED
GLFSGYDEAK RVYADKSGWG YELGEDGYAK VDPTLQHPRC VFQLMKQHYS RYTPELASMT
CGMPQDAMMK VWEEIASCSV PGKTMTILYA LGWTQHSIGA QIIRSAAMVQ LLLGNVGMPG
GGVNALRGHS NIQGLTDLGL LSNSLPGYLT LAGDAEQDYA AYIDKRASKP LRPGQLSYWQ
NYGKFHVSLM KAWYGANATA ENNWGYDWLP KLDVPAYDVL RMFEMMGQGK VNGYMCQGFN
PIAALPDKNR VTAALGKLKW LVIMDPLATE TSEFWRNVGP FNDVDTASIQ TEVIRLPTTC
FAEEDGSLVN SSRWLQWHWK GADGPGETRT DVQIMSELFL RLRQRYQAEG GAYPDAIMNI
SWPYKIPEEP SPEELAKEMN GWAVADVTDP TGAVIKAGQQ LAGFGQLKDD GSTASGCWIF
AGSWTEQGNQ MARRDNSDPY GMHQVQNWAW AWPANRRILY NRASSDPQGK PWDPEKKRLV
WWNGKAWTGT DVPDFKVDSP PEAGMNPFIM NPEGVARFFA IDKMAEGPFP EHYEPFETPI
GINPLHPQNK KATSNPAGRI FDSVWDTLGT HDEFPYAATT YRLTEHFHFW SKHCRLNAIA
QPEQFVEIGE VLANEKGIKA GDRVRVSSKR GHIDAVAVVT KRIRPLQVNN QTVHQIGIPL
HWGFTGATRH GYLTNTLVPF LGDGNTQTPE SKSFLVKVEK L
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