| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0496 |
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| Symbol | rpsQ |
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| ID | 5193712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 570484 |
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| End bp | 570750 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640584950 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_001265850 |
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| Protein GI | 148545748 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000477154 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.104043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG CTGAAAAAAC CGTCCGTACG CTGACTGGCC GTGTCGTCAG CGACAAAATG
GACAAGACCA TCACCGTTCT GATCGAGCGT CGCGTAAAGC ACCCGATCTA CGGTAAATAC
GTTAAGCGTT CGACTAAGCT GCACGCGCAC GACGAAGCCA ACCAGTGCAA GATCGGCGAC
AAGGTTTCCA TCCGTGAAAC CCGTCCGCTG GCCAAGACCA AGTCCTGGGC ACTGGTTGAA
GTCCTCGAAC GCGCTGTTGA AGTCTAA
|
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| Protein sequence | MAEAEKTVRT LTGRVVSDKM DKTITVLIER RVKHPIYGKY VKRSTKLHAH DEANQCKIGD
KVSIRETRPL AKTKSWALVE VLERAVEV
|
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