| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0494 |
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| Symbol | rplP |
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| ID | 5193160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 569877 |
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| End bp | 570290 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640584948 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001265848 |
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| Protein GI | 148545746 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000649536 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.106495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGCAAC CAAAGCGTAC AAAATTCCGC AAGCAGATGA CTGGCCACAA CCGTGGTCTG
GCACTGCGCG GTAGCAAAGT CAGCTTCGGC GAATTCGCCC TGAAAGCTGT TGCTCGCGGT
CGCCTCACCG CTCGCCAGAT CGAGTCCGCA CGTCGTGCGC TGACCCGTCA CGTTAAGCGT
GGCGGTAAGA TCTGGATCCG TGTGTTCCCG GACAAGCCGA TCTCCAAAAA ACCTCTTGAG
GTTCGTATGG GTAAAGGTAA GGGCTCCGTG GAATACTGGG TTGCCCAGAT TCAGCCAGGC
AAAGTCCTGT ACGAGATCGA GGGTGTTTCT GAAGAGCTGG CGCGCGAAGC TTTCGCCCTG
GCTGCTGCAA AGCTGCCTCT CGCCACCTCC TTTGTTAAGC GGACGGTGAT GTGA
|
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| Protein sequence | MLQPKRTKFR KQMTGHNRGL ALRGSKVSFG EFALKAVARG RLTARQIESA RRALTRHVKR
GGKIWIRVFP DKPISKKPLE VRMGKGKGSV EYWVAQIQPG KVLYEIEGVS EELAREAFAL
AAAKLPLATS FVKRTVM
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